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Report for CCDS23537.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23537.1 Public Mus musculus 9 Ip6k2 23 108 98 CCDS HistoryNCBI Gene:76500Re-query CCDS DB by CCDS ID:23537.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23537.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000085018.5 ENSMUSP00000082091.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000085018.5Link to Ensembl Protein Viewer:ENSMUSP00000082091.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000085018Re-query CCDS DB by Protein ID:ENSMUSP00000082091
Original member Current member NCBI NM_029634.2 NP_083910.2 Accepted alive Link to Nucleotide Sequence:NM_029634.2Link to Protein Sequence:NP_083910.2Re-query CCDS DB by Nucleotide ID:NM_029634Re-query CCDS DB by Protein ID:NP_083910Link to BLAST:NP_083910.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083910.2 448 Q80V72 448 100% 0 0

Chromosomal Locations for CCDS 23537.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 108796195 108796396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108798110 108798178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108798271 108798493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108799242 108799417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108804542 108804717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108805539 108806039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1347 nt):
ATGAGCCCAGCCTTCAGGACCATGGACGTGGAGCCCCGCACCAAGGGCATCCTGCTGGAGCCATTTGTCC
ACCAGGTTGGGGGGCACTCATGCGTTCTCCGATTCAATGAGACAACCCTGTGCAAACCCCTGGTTCCGAG
GGAGCATCAGTTCTACGAGACCCTCCCAGCTGAGATGCGCAGATTCACTCCCCAGTACAAAGCTGTCTTG
ATATTTGTTAGGTGTGCAGATGAGTTTGGGGCCTCTGGCAACATAGAGACTAAGGAACAGGGTGTGGTAT
CAGTACGCTTTGAAGAAGATGAAGACAGGAACTTGTGTTTAATAGCATATCCATTAAAAGGGGACCATGG
AACTGTGGATATAGTAGACAATTCGGACTGTGAACCAAAAAGTAAGCTGCTAAGATGGACAAACAAAAAG
CATCATGCCCTAGAAACAGAAAAGAATCCCAAGGACTGGGTACGCCAGCACCGGAAAGAGGAGAAGATGA
AGAGCCATAAGTTAGAAGAAGAATTTGAGTGGCTAAAGAAATCTGAAGTCTTATACTACAGTGTAGAAAA
AAAGGGAAATGTAAGTTCCCAGCTTAAACACTATAACCCTTGGAGCATGAAATGTCATCAACAACAGTTA
CAGAGAATGAAGGAGAATGCCAAGCATCGAAACCAGTACAAATTCATCTTACTGGAGAACCTGACTTCCC
GCTATGAGGTACCTTGTGTCCTGGACCTCAAGATGGGCACACGCCAGCATGGCGATGATGCTTCGGAGGA
AAAAGCAGCTAACCAGATCCGAAAATGTCAGCAGAGCACGTCTGCGGTCATCGGTGTTCGAGTGTGCGGC
ATGCAGGTGTACCAGGCGGGCACTGGGCAGCTCATGTTCATGAACAAGTACCATGGGCGGAAGCTTTCGG
TGCAGGGCTTCAAGGAGGCGCTTTTCCAGTTCTTTCACAATGGGCGGTACCTGCGCCGTGAGCTCCTGGG
CCCTGTGCTCAAGAAGCTAACTGAGCTCAAGGCCGTGTTGGAGCGACAGGAATCCTACCGCTTCTATTCA
AGTTCCCTACTGGTCATCTATGATGGCAAGGAGTGGCCAGAAGTGACCCTGGACTCAGATGCTGAGGACT
TGGAGGACCTCTCCGAAGAGTCGGCTGATGAGTCTGCCGGTGCCTATGCCTACAAGCCCATCGGTGCCAG
CTCAGTGGACGTGCGCATGATTGACTTTGCACACACCACCTGCAGGCTGTATGGCGAGGACAGTGTGGTG
CATGAGGGCCAGGATGCTGGCTATATCTTTGGGCTGCAGAGCCTGATAGACATTGTCACAGAGATAAGTG
AGGAGAGTGGGGAGTGA

Translation (448 aa):
MSPAFRTMDVEPRTKGILLEPFVHQVGGHSCVLRFNETTLCKPLVPREHQFYETLPAEMRRFTPQYKAVL
IFVRCADEFGASGNIETKEQGVVSVRFEEDEDRNLCLIAYPLKGDHGTVDIVDNSDCEPKSKLLRWTNKK
HHALETEKNPKDWVRQHRKEEKMKSHKLEEEFEWLKKSEVLYYSVEKKGNVSSQLKHYNPWSMKCHQQQL
QRMKENAKHRNQYKFILLENLTSRYEVPCVLDLKMGTRQHGDDASEEKAANQIRKCQQSTSAVIGVRVCG
MQVYQAGTGQLMFMNKYHGRKLSVQGFKEALFQFFHNGRYLRRELLGPVLKKLTELKAVLERQESYRFYS
SSLLVIYDGKEWPEVTLDSDAEDLEDLSEESADESAGAYAYKPIGASSVDVRMIDFAHTTCRLYGEDSVV
HEGQDAGYIFGLQSLIDIVTEISEESGE


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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