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Report for CCDS21437.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21437.1 Public Mus musculus 7 Nox4 23 108 98 CCDS HistoryNCBI Gene:50490Re-query CCDS DB by CCDS ID:21437.1Re-query CCDS DB by GeneID:50490See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21437.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032781.13 ENSMUSP00000032781.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032781.13Link to Ensembl Protein Viewer:ENSMUSP00000032781.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000032781Re-query CCDS DB by Protein ID:ENSMUSP00000032781
Original member Current member NCBI NM_015760.5 NP_056575.1 Accepted alive Link to Nucleotide Sequence:NM_015760.5Link to Protein Sequence:NP_056575.1Re-query CCDS DB by Nucleotide ID:NM_015760Re-query CCDS DB by Protein ID:NP_056575Link to BLAST:NP_056575.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056575.1 578 Q9JHI8-1 578 100% 0 0

Chromosomal Locations for CCDS 21437.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 87246846 87246902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87247488 87247583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87295784 87295894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87297455 87297539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87304838 87304935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87306729 87306756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87314064 87314136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87317231 87317311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87321546 87321762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87323633 87323797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87323933 87323995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87338957 87339017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87360728 87360809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87370018 87370137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87371919 87372027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87374354 87374422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87376182 87376282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87396771 87396891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1737 nt):
ATGGCGGTGTCCTGGAGGAGCTGGCTGGCCAACGAAGGGGTTAAACACCTCTGCCTGCTCATTTGGCTGT
CCCTAAACGTTCTACTTTTCTGGAAAACCTTCCTGCTGTACAACCAAGGGCCAGAATACTACTACATTCA
CCAAATGTTGGGCCTAGGATTGTGTTTAAGCAGAGCATCTGCATCTGTCCTGAACCTCAACTGCAGCCTC
ATCCTTTTACCTATGTGCCGGACAGTCCTGGCTTATCTTCGAGGATCACAGAAGGTCCCTAGCAGGAGAA
CAAGAAGATTGTTGGATAAAAGCAAGACTCTACACATCACATGTGGTGTAACTATCTGTATTTTCTCAGG
TGTGCATGTAGCCGCCCACTTGGTGAATGCCCTCAACTTTTCAGTGAACTACAGTGAAGATTTCCTTGAA
CTGAATGCAGCAAGATACCAGAATGAGGATCCCAGAAAGCTTCTCTTCACAACCATTCCTGGTCTGACGG
GTGTCTGCATGGTGGTGGTATTGTTCCTCATGGTTACAGCTTCTACCTACGCAATAAGAGTTTCTAATTA
TGATATCTTCTGGTATACTCACAACCTCTTCTTTGTCTTCTACATGCTGCTGCTGTTGCATGTTTCAGGT
GGTTTGTTGAAGTATCAGACAAATGTAGACACTCACCCTCCTGGCTGCATTAGTCTTAACCAGACATCAT
CCCAGAATATGTCCATACCAGACTACGTCTCAGAACATTTTCATGGATCTTTGCCTCGAGGGTTTTCAAA
ATTAGAAGATCGTTACCAGAAAACACTTGTGAAGATTTGCCTGGAAGAACCCAAGTTCCAAGCTCATTTC
CCACAGACCTGGATTTGGATTTCTGGACCTTTGTGCCTTTATTGTGCGGAGAGACTTTACCGATGCATCA
GGAGCAACAAACCTGTCACCATCATCTCAGTCATCAATCATCCCTCTGATGTAATGGAACTCCGTATGAT
CAAAGAAAACTTTAAAGCAAGACCTGGCCAGTATATTATTCTCCATTGCCCCAGTGTATCAGCATTAGAA
AACCACCCATTTACTCTCACAATGTGTCCTACTGAAACCAAAGCAACATTTGGTGTCCACTTTAAAGTAG
TAGGAGACTGGACAGAACGATTCCGGGATTTGCTACTGCCTCCATCAAGTCAAGACTCTGAGATTCTGCC
CTTCATTCACTCTAGAAATTACCCTAAGTTATACATTGATGGTCCATTTGGAAGCCCATTTGAGGAGTCA
CTGAACTATGAAGTTAGTCTCTGTGTGGCTGGAGGCATTGGAGTCACTCCATTTGCATCGATACTAAACA
CTCTACTGGATGACTGGAAACCATACAAGTTAAGAAGACTGTACTTTATCTGGGTGTGCAGAGACATCCA
ATCATTCCAGTGGTTTGCAGATTTACTCTGTGTGTTGCATAACAAGTTTTGGCAAGAAAACAGACCTGAC
TTTGTGAACATCCAGCTGTACCTCAGTCAAACAGATGGGATTCAGAAGATAATTGGAGAAAAATATCACA
CACTGAATTCGAGACTTTTCATTGGGCGTCCTCGGTGGAAACTTTTATTTGATGAAATAGCAAAATGTAA
CAGAGGGAAAACAGTTGGAGTTTTCTGCTGTGGACCCAGTTCTATTTCCAAGACTCTTCATAGTTTGAGT
AACCGGAACAACTCATATGGGACAAAATTTGAATACAATAAAGAATCCTTCAGCTGA

Translation (578 aa):
MAVSWRSWLANEGVKHLCLLIWLSLNVLLFWKTFLLYNQGPEYYYIHQMLGLGLCLSRASASVLNLNCSL
ILLPMCRTVLAYLRGSQKVPSRRTRRLLDKSKTLHITCGVTICIFSGVHVAAHLVNALNFSVNYSEDFLE
LNAARYQNEDPRKLLFTTIPGLTGVCMVVVLFLMVTASTYAIRVSNYDIFWYTHNLFFVFYMLLLLHVSG
GLLKYQTNVDTHPPGCISLNQTSSQNMSIPDYVSEHFHGSLPRGFSKLEDRYQKTLVKICLEEPKFQAHF
PQTWIWISGPLCLYCAERLYRCIRSNKPVTIISVINHPSDVMELRMIKENFKARPGQYIILHCPSVSALE
NHPFTLTMCPTETKATFGVHFKVVGDWTERFRDLLLPPSSQDSEILPFIHSRNYPKLYIDGPFGSPFEES
LNYEVSLCVAGGIGVTPFASILNTLLDDWKPYKLRRLYFIWVCRDIQSFQWFADLLCVLHNKFWQENRPD
FVNIQLYLSQTDGIQKIIGEKYHTLNSRLFIGRPRWKLLFDEIAKCNRGKTVGVFCCGPSSISKTLHSLS
NRNNSYGTKFEYNKESFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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