NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS84328.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84328.1 Public Mus musculus 17 4930583I09Rik 23 108 98 CCDS HistoryNCBI Gene:78057Re-query CCDS DB by CCDS ID:84328.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 84328.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000024896.3 ENSMUSP00000024896.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000024896.3Link to Ensembl Protein Viewer:ENSMUSP00000024896.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000024896Re-query CCDS DB by Protein ID:ENSMUSP00000024896
Original member Current member NCBI NM_030031.1 NP_084307.1 Accepted alive Link to Nucleotide Sequence:NM_030031.1Link to Protein Sequence:NP_084307.1Re-query CCDS DB by Nucleotide ID:NM_030031Re-query CCDS DB by Protein ID:NP_084307Link to BLAST:NP_084307.1

Chromosomal Locations for CCDS 84328.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 64832702 64832756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64834272 64834344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64834426 64834606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (309 nt):
ATGTCAATGACTCAGATACAGAGAAACCACTCGCTGATGGACACTCTCTTTAAAAAGCACTCACACGCAG
AGGAGTTGCACCTTTGGGACACCATAAAGAATGGATCGAATAGTAGAAACTTCTTCAAAGTGACCGTCTA
TCTCCAGAGCCAGAGTAACATCTCTACGAAAGGCTGCCTAGGGCTTTGGCTCAGATTTACTGCCTGCCAT
TTGCTGCTTGATACCCTCCTTCAGAATCAAGCCAGCCCTGCCAGAAGCCATGGAAACAGGAGCTTGGAGC
AGGGCCCAGCAAAATGGCTTGGAGGGTAA

Translation (102 aa):
MSMTQIQRNHSLMDTLFKKHSHAEELHLWDTIKNGSNSRNFFKVTVYLQSQSNISTKGCLGLWLRFTACH
LLLDTLLQNQASPARSHGNRSLEQGPAKWLGG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH