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Report for CCDS2832.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2832.1 Public Homo sapiens 3 MAPKAPK3 24 110 108 CCDS HistoryNCBI Gene:7867Re-query CCDS DB by CCDS ID:2832.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2832.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357955.6 ENSP00000350639.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000357955.6Link to Ensembl Protein Viewer:ENSP00000350639.2Re-query CCDS DB by Nucleotide ID:ENST00000357955Re-query CCDS DB by Protein ID:ENSP00000350639
Original member Current member EBI ENST00000446044.5 ENSP00000396467.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000446044.5Link to Ensembl Protein Viewer:ENSP00000396467.1Re-query CCDS DB by Nucleotide ID:ENST00000446044Re-query CCDS DB by Protein ID:ENSP00000396467
Original member Current member EBI ENST00000621469.5 ENSP00000478922.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000621469.5Link to Ensembl Protein Viewer:ENSP00000478922.1Re-query CCDS DB by Nucleotide ID:ENST00000621469Re-query CCDS DB by Protein ID:ENSP00000478922
Original member Current member NCBI NM_001243925.2 NP_001230854.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001243925.2Link to Protein Sequence:NP_001230854.1Re-query CCDS DB by Nucleotide ID:NM_001243925Re-query CCDS DB by Protein ID:NP_001230854Link to BLAST:NP_001230854.1
Original member Current member NCBI NM_001243926.2 NP_001230855.1 Accepted alive Link to Nucleotide Sequence:NM_001243926.2Link to Protein Sequence:NP_001230855.1Re-query CCDS DB by Nucleotide ID:NM_001243926Re-query CCDS DB by Protein ID:NP_001230855Link to BLAST:NP_001230855.1
Original member Current member NCBI NM_004635.5 NP_004626.1 Accepted alive Link to Nucleotide Sequence:NM_004635.5Link to Protein Sequence:NP_004626.1Re-query CCDS DB by Nucleotide ID:NM_004635Re-query CCDS DB by Protein ID:NP_004626Link to BLAST:NP_004626.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001230854.1 382 Q16644 382 100% 0 0
NP_001230855.1 382 Q16644 382 100% 0 0
NP_004626.1 382 Q16644 382 100% 0 0

Chromosomal Locations for CCDS 2832.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 50617566 50617784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50640366 50640505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50641707 50641771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50642253 50642332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50644409 50644532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50645710 50645785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50646140 50646264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50646740 50646825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50647123 50647203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 50647894 50648046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1149 nt):
ATGGATGGTGAAACAGCAGAGGAGCAGGGGGGCCCTGTGCCCCCGCCAGTTGCACCCGGCGGACCCGGCT
TGGGCGGTGCTCCGGGGGGGCGGCGGGAGCCCAAGAAGTACGCAGTGACCGACGACTACCAGTTGTCCAA
GCAGGTGCTGGGCCTGGGTGTGAACGGCAAAGTGCTGGAGTGCTTCCATCGGCGCACTGGACAGAAGTGT
GCCCTGAAGCTCCTGTATGACAGCCCCAAGGCCCGGCAGGAGGTAGACCATCACTGGCAGGCTTCTGGCG
GCCCCCATATTGTCTGCATCCTGGATGTGTATGAGAACATGCACCATGGCAAGCGCTGTCTCCTCATCAT
CATGGAATGCATGGAAGGTGGTGAGTTGTTCAGCAGGATTCAGGAGCGTGGCGACCAGGCTTTCACTGAG
AGAGAAGCTGCAGAGATAATGCGGGATATTGGCACTGCCATCCAGTTTCTGCACAGCCATAACATTGCCC
ACCGAGATGTCAAGCCTGAAAACCTACTCTACACATCTAAGGAGAAAGACGCAGTGCTTAAGCTCACCGA
TTTTGGCTTTGCTAAGGAGACCACCCAAAATGCCCTGCAGACACCCTGCTATACTCCCTATTATGTGGCC
CCTGAGGTCCTGGGTCCAGAGAAGTATGACAAGTCATGTGACATGTGGTCCCTGGGTGTCATCATGTACA
TCCTCCTTTGTGGCTTCCCACCCTTCTACTCCAACACGGGCCAGGCCATCTCCCCGGGGATGAAGAGGAG
GATTCGCCTGGGCCAGTACGGCTTCCCCAATCCTGAGTGGTCAGAAGTCTCTGAGGATGCCAAGCAGCTG
ATCCGCCTCCTGTTGAAGACAGACCCCACAGAGAGGCTGACCATCACTCAGTTCATGAACCACCCCTGGA
TCAACCAATCGATGGTAGTGCCACAGACCCCACTCCACACGGCCCGAGTGCTGCAGGAGGACAAAGACCA
CTGGGACGAAGTCAAGGAGGAGATGACCAGTGCCTTGGCCACTATGCGGGTAGACTACGACCAGGTGAAG
ATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAGAAAAAAGCAGGCAGGCAGCTCCT
CTGCCTCACAGGGCTGCAACAACCAGTAG

Translation (382 aa):
MDGETAEEQGGPVPPPVAPGGPGLGGAPGGRREPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKC
ALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTE
REAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVA
PEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQL
IRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQEDKDHWDEVKEEMTSALATMRVDYDQVK
IKDLKTSNNRLLNKRRKKQAGSSSASQGCNNQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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