NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS30346.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30346.1 Public Mus musculus X P2ry10 23 108 98 CCDS HistoryNCBI Gene:78826Re-query CCDS DB by CCDS ID:30346.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30346.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053375.3 ENSMUSP00000061296.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053375.3Link to Ensembl Protein Viewer:ENSMUSP00000061296.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000053375Re-query CCDS DB by Protein ID:ENSMUSP00000061296
Original member Current member EBI ENSMUST00000118666.7 ENSMUSP00000113507.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000118666.7Link to Ensembl Protein Viewer:ENSMUSP00000113507.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000118666Re-query CCDS DB by Protein ID:ENSMUSP00000113507
Original member Current member NCBI NM_001357810.1 NP_001344739.1 Accepted alive Link to Nucleotide Sequence:NM_001357810.1Link to Protein Sequence:NP_001344739.1Re-query CCDS DB by Nucleotide ID:NM_001357810Re-query CCDS DB by Protein ID:NP_001344739Link to BLAST:NP_001344739.1
Original member Current member NCBI NM_172435.4 NP_766023.1 Accepted alive Link to Nucleotide Sequence:NM_172435.4Link to Protein Sequence:NP_766023.1Re-query CCDS DB by Nucleotide ID:NM_172435Re-query CCDS DB by Protein ID:NP_766023Link to BLAST:NP_766023.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001344739.1 328 Q8BFU7 328 100% 0 0
NP_766023.1 328 Q8BFU7 328 100% 0 0

Chromosomal Locations for CCDS 30346.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 107102461 107103447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGGGCAGCAACAGTACCAGCAGTGCTGAGAGCAATTGCAATGCCACTTATTTGCCATTTCAGTACTCTC
TGTATGCAACTACCTATATCTTCATATTCATCCCGGGTCTCCTGGCTAACAGTGCAGCCCTGTGGGTTCT
GTGCCGCTTCATCAGCAAGAAGAACAAGGCCATCATTTTCATGATCAACCTCTCAGTGGCAGACCTTGCT
CATATCCTGTCCTTACCTCTTCGGATTTACTATTATATCAATCGTCACTGGCCATTCCAGAGGGCCCTTT
GCCTGCTGTGTTTCTATCTGAAATATCTCAACATGTATGCCAGCATTTTTTTCTTGACATGCATTAGCCT
TCAGAGGTGCCTCTTTCTCCTCAAACCATTCAGAGCCAGAAACTGGAAGCGTAGGTACGATGTGGGCATC
AGTGCTGTCATCTGGATTGTTGTAGGGACTGCCTGTTTGCCATTTCCCATCCTGAGAAATGCTGGCTTAG
CCAATAGCACAGATTCTTGCTTTGCTGATCTTGGGTACAAACAGATGGATGCAGTGGTTCTGGTCACCAT
GGTTGTAATTGCTGAACTTGCTGGATTTGTGATTCCAGTGATCACCATTGCATGTTGTACCTGGAAAACA
ACTGTATCCTTGAAACACCCACCAATTGCTTTTCAAGGGATTAGTGAGAGGAAAAAAGCATTGCGGATGG
TTTTCATGTGTGCTGCAGTCTTCGTTATCTGCTTCACTCCTTATCACATTAACTTCATTTTTTACACCAT
GGTAAAGGAAAGCATCATTACCAGTTGTCCCACTGTAAAAAGTACCCTGTATTTCCATCCTTTTTCCCTA
TGCCTTGCAAGTCTCTGTTGTCTTTTGGACCCAATTCTGTACTATTTCATGGCTTCAGAGTTTCGTGACC
AACTATCTCGTCATGGAAGCTCTGTTACTCGTTCTCGTCTCATGAGCAGGGAGAGTGGATCATCAATGGT
TAACTAA

Translation (328 aa):
MGSNSTSSAESNCNATYLPFQYSLYATTYIFIFIPGLLANSAALWVLCRFISKKNKAIIFMINLSVADLA
HILSLPLRIYYYINRHWPFQRALCLLCFYLKYLNMYASIFFLTCISLQRCLFLLKPFRARNWKRRYDVGI
SAVIWIVVGTACLPFPILRNAGLANSTDSCFADLGYKQMDAVVLVTMVVIAELAGFVIPVITIACCTWKT
TVSLKHPPIAFQGISERKKALRMVFMCAAVFVICFTPYHINFIFYTMVKESIITSCPTVKSTLYFHPFSL
CLASLCCLLDPILYYFMASEFRDQLSRHGSSVTRSRLMSRESGSSMVN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH