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Report for CCDS33941.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33941.1 Public Homo sapiens 4 HAUS3 24 110 108 CCDS HistoryNCBI Gene:79441Re-query CCDS DB by CCDS ID:33941.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33941.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000243706.8 ENSP00000243706.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000243706.8Link to Ensembl Protein Viewer:ENSP00000243706.4Re-query CCDS DB by Nucleotide ID:ENST00000243706Re-query CCDS DB by Protein ID:ENSP00000243706
Original member Current member EBI ENST00000443786.3 ENSP00000392903.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000443786.3Link to Ensembl Protein Viewer:ENSP00000392903.2Re-query CCDS DB by Nucleotide ID:ENST00000443786Re-query CCDS DB by Protein ID:ENSP00000392903
Original member Current member EBI ENST00000672739.1 ENSP00000500512.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000672739.1Link to Ensembl Protein Viewer:ENSP00000500512.1Re-query CCDS DB by Nucleotide ID:ENST00000672739Re-query CCDS DB by Protein ID:ENSP00000500512
Original member Current member NCBI NM_001303143.2 NP_001290072.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001303143.2Link to Protein Sequence:NP_001290072.1Re-query CCDS DB by Nucleotide ID:NM_001303143Re-query CCDS DB by Protein ID:NP_001290072Link to BLAST:NP_001290072.1
Original member Current member NCBI NM_024511.7 NP_078787.2 Accepted alive Link to Nucleotide Sequence:NM_024511.7Link to Protein Sequence:NP_078787.2Re-query CCDS DB by Nucleotide ID:NM_024511Re-query CCDS DB by Protein ID:NP_078787Link to BLAST:NP_078787.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001290072.1 603 Q68CZ6-1 603 100% 0 0
NP_078787.2 603 Q68CZ6-1 603 100% 0 0

Chromosomal Locations for CCDS 33941.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 2231927 2232160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2236228 2236456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2238604 2239043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2240038 2240946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1812 nt):
ATGAGTTGTGGAAATGAGTTTGTGGAAACATTAAAAAAAATTGGTTATCCCAAAGCTGATAATCTTAATG
GAGAAGACTTTGACTGGTTGTTTGAGGGCGTTGAAGATGAATCGTTTCTGAAGTGGTTTTGTGGGAATGT
GAATGAACAGAACGTGTTGTCTGAAAGAGAATTGGAAGCTTTTAGCATTCTTCAGAAATCAGGCAAGCCT
ATTCTAGAAGGGGCGGCATTGGATGAAGCTCTTAAAACGTGTAAAACTTCTGATTTGAAGACACCTAGAC
TGGATGATAAAGAGCTGGAGAAATTAGAGGATGAGGTTCAAACTCTACTGAAATTAAAGAACCTAAAAAT
TCAGCGACGTAATAAATGTCAATTGATGGCTTCAGTAACTAGCCACAAATCTCTGAGGTTAAATGCTAAA
GAAGAAGAAGCCACTAAAAAGCTGAAGCAGAGTCAAGGAATTCTAAATGCAATGATCACTAAGATCAGTA
ATGAACTTCAGGCTCTTACTGATGAAGTTACACAATTGATGATGTTCTTCAGACATTCTAATTTAGGTCA
AGGGACAAATCCACTGGTATTTTTATCGCAATTTTCCTTGGAAAAATACCTAAGTCAGGAAGAGCAAAGC
ACAGCAGCATTAACTTTGTATACCAAAAAACAGTTCTTTCAGGGTATACATGAAGTAGTTGAAAGTTCAA
ATGAAGACAATTTTCAACTTTTAGATATACAGACACCATCTATTTGTGATAATCAAGAAATCCTTGAGGA
GAGACGACTAGAGATGGCTAGACTGCAGCTCGCATACATTTGTGCTCAACATCAGTTAATTCACTTAAAA
GCAAGTAATTCGAGCATGAAGTCAAGTATAAAATGGGCAGAGGAGAGTCTTCACAGCCTAACCAGCAAGG
CTGTGGACAAAGAAAATTTGGATGCTAAAATTTCTAGCTTGACCAGTGAGATTATGAAACTTGAAAAAGA
GGTCACTCAAATAAAAGACAGAAGTTTACCTGCTGTGGTAAGAGAGAATGCCCAGTTATTGAATATGCCA
GTGGTAAAGGGAGATTTTGATCTGCAGATTGCTAAACAAGATTATTATACAGCAAGACAAGAGTTAGTTT
TAAATCAATTAATAAAACAAAAGGCATCATTTGAACTTCTACAGTTATCATATGAAATTGAATTAAGAAA
GCATCGGGACATATATCGTCAACTTGAAAATTTGGTTCAAGAACTTAGTCAAAGTAACATGATGCTCTAC
AAGCAATTAGAAATGTTAACAGATCCATCAGTTTCTCAACAGATAAATCCAAGGAATACCATTGATACTA
AGGATTATTCTACTCATAGGCTTTACCAAGTTTTGGAGGGAGAGAATAAGAAAAAAGAATTGTTTCTAAC
TCATGGAAACCTTGAGGAAGTGGCTGAGAAATTGAAACAGAATATTTCTTTAGTACAAGATCAGTTGGCA
GTATCTGCTCAAGAACATTCTTTCTTTCTGTCCAAACGGAATAAGGATGTGGACATGCTTTGTGATACTT
TGTATCAAGGAGGAAATCAGCTTTTGCTTAGTGATCAGGAGTTAACAGAGCAGTTTCATAAAGTTGAATC
TCAACTGAATAAGCTAAATCATCTCCTCACTGATATTCTTGCTGATGTGAAGACAAAAAGAAAAACTTTG
GCAAATAATAAATTACATCAAATGGAAAGAGAATTCTATGTATATTTTTTAAAAGATGAAGATTATCTGA
AAGATATTGTGGAGAATTTAGAAACTCAATCAAAGATTAAGGCTGTTAGTCTTGAAGATTGA

Translation (603 aa):
MSCGNEFVETLKKIGYPKADNLNGEDFDWLFEGVEDESFLKWFCGNVNEQNVLSERELEAFSILQKSGKP
ILEGAALDEALKTCKTSDLKTPRLDDKELEKLEDEVQTLLKLKNLKIQRRNKCQLMASVTSHKSLRLNAK
EEEATKKLKQSQGILNAMITKISNELQALTDEVTQLMMFFRHSNLGQGTNPLVFLSQFSLEKYLSQEEQS
TAALTLYTKKQFFQGIHEVVESSNEDNFQLLDIQTPSICDNQEILEERRLEMARLQLAYICAQHQLIHLK
ASNSSMKSSIKWAEESLHSLTSKAVDKENLDAKISSLTSEIMKLEKEVTQIKDRSLPAVVRENAQLLNMP
VVKGDFDLQIAKQDYYTARQELVLNQLIKQKASFELLQLSYEIELRKHRDIYRQLENLVQELSQSNMMLY
KQLEMLTDPSVSQQINPRNTIDTKDYSTHRLYQVLEGENKKKELFLTHGNLEEVAEKLKQNISLVQDQLA
VSAQEHSFFLSKRNKDVDMLCDTLYQGGNQLLLSDQELTEQFHKVESQLNKLNHLLTDILADVKTKRKTL
ANNKLHQMEREFYVYFLKDEDYLKDIVENLETQSKIKAVSLED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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