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Report for CCDS8019.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8019.1 Public Homo sapiens 11 ASRGL1 24 110 108 CCDS HistoryNCBI Gene:80150Re-query CCDS DB by CCDS ID:8019.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8019.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301776.9 ENSP00000301776.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000301776.9Link to Ensembl Protein Viewer:ENSP00000301776.5Re-query CCDS DB by Nucleotide ID:ENST00000301776Re-query CCDS DB by Protein ID:ENSP00000301776
Original member Current member EBI ENST00000415229.6 ENSP00000400057.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000415229.6Link to Ensembl Protein Viewer:ENSP00000400057.2Re-query CCDS DB by Nucleotide ID:ENST00000415229Re-query CCDS DB by Protein ID:ENSP00000400057
Original member Current member NCBI NM_001083926.2 NP_001077395.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001083926.2Link to Protein Sequence:NP_001077395.1Re-query CCDS DB by Nucleotide ID:NM_001083926Re-query CCDS DB by Protein ID:NP_001077395Link to BLAST:NP_001077395.1
Original member Current member NCBI NM_025080.4 NP_079356.3 Accepted alive Link to Nucleotide Sequence:NM_025080.4Link to Protein Sequence:NP_079356.3Re-query CCDS DB by Nucleotide ID:NM_025080Re-query CCDS DB by Protein ID:NP_079356Link to BLAST:NP_079356.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001077395.1 308 Q7L266-1 308 100% 0 0
NP_079356.3 308 Q7L266-1 308 100% 0 0

Chromosomal Locations for CCDS 8019.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 62337978 62338167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62356325 62356467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62356987 62357144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62389133 62389251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62391522 62391632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62392079 62392284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (927 nt):
ATGAATCCCATCGTAGTGGTCCACGGCGGCGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGCGAGTGC
ACCAGGGCATGGTCAGAGCCGCCACCGTGGGCTACGGCATCCTCCGGGAGGGCGGGAGCGCCGTGGATGC
CGTAGAGGGAGCTGTCGTCGCCCTGGAAGACGATCCCGAGTTCAACGCAGGTTGTGGGTCTGTCTTGAAC
ACAAATGGTGAGGTTGAAATGGATGCTAGTATCATGGATGGAAAAGACCTGTCTGCAGGAGCAGTGTCCG
CAGTCCAGTGTATAGCAAATCCCATTAAACTTGCTCGGCTTGTCATGGAAAAGACACCTCATTGCTTTCT
GACTGACCAAGGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTTCCAGAGATTCCTGGAGAAAAACTGGTG
ACAGAGAGAAACAAAAAGCGCCTGGAAAAAGAGAAGCATGAAAAAGGTGCTCAGAAAACAGATTGTCAAA
AAAACTTGGGAACCGTGGGTGCTGTTGCCTTGGACTGCAAAGGGAATGTAGCCTACGCAACCTCCACAGG
CGGTATCGTTAATAAAATGGTCGGCCGCGTTGGGGACTCACCGTGTCTAGGAGCTGGAGGTTATGCCGAC
AATGACATCGGAGCCGTCTCAACCACAGGGCATGGGGAAAGCATCCTGAAGGTGAACCTGGCTAGACTCA
CCCTGTTCCACATAGAACAAGGAAAGACGGTAGAAGAGGCTGCGGACCTATCGTTGGGTTATATGAAGTC
AAGGGTTAAAGGTTTAGGTGGCCTCATCGTGGTTAGCAAAACAGGAGACTGGGTGGCAAAGTGGACCTCC
ACCTCCATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAATTGATCCTGACGATACTACTA
TCACCGACCTTCCCTAA

Translation (308 aa):
MNPIVVVHGGGAGPISKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPEFNAGCGSVLN
TNGEVEMDASIMDGKDLSAGAVSAVQCIANPIKLARLVMEKTPHCFLTDQGAAQFAAAMGVPEIPGEKLV
TERNKKRLEKEKHEKGAQKTDCQKNLGTVGAVALDCKGNVAYATSTGGIVNKMVGRVGDSPCLGAGGYAD
NDIGAVSTTGHGESILKVNLARLTLFHIEQGKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTS
TSMPWAAAKDGKLHFGIDPDDTTITDLP


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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