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Report for CCDS4721.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4721.2 Public Homo sapiens 6 VWA7 24 110 108 CCDS HistoryNCBI Gene:80737Re-query CCDS DB by CCDS ID:4721.2See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 4721.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375688.5 ENSP00000364840.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375688.5Link to Ensembl Protein Viewer:ENSP00000364840.4Re-query CCDS DB by Nucleotide ID:ENST00000375688Re-query CCDS DB by Protein ID:ENSP00000364840
Original member Current member NCBI NM_025258.3 NP_079534.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025258.3Link to Protein Sequence:NP_079534.2Re-query CCDS DB by Nucleotide ID:NM_025258Re-query CCDS DB by Protein ID:NP_079534Link to BLAST:NP_079534.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079534.2 891 Q9Y334-1 891 100% 0 0

Chromosomal Locations for CCDS 4721.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 31765594 31765770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31765883 31766057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31766245 31766384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31766463 31766764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31767158 31767250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31767362 31767514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31767622 31767754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31769018 31769203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31769675 31769791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31770001 31770113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31772954 31773123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31773242 31773437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31774516 31774626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31775333 31775429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31775964 31776242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31776546 31776779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2676 nt):
ATGCTCCCCACGGAGGTCCCCCAATCCCACCCGGGCCCCTCAGCGTTGCTTCTGCTGCAGCTGTTGCTGC
CCCCCACATCTGCCTTCTTCCCCAACATCTGGAGCCTGCTGGCTGCCCCTGGCTCCATCACCCACCAAGA
CCTAACTGAGGAGGCAGCGCTCAACGTCACCCTGCAGCTCTTCCTGGAGCAGCCACCCCCAGGCCGCCCC
CCTCTTCGTCTTGAGGACTTCCTGGGTCGAACACTCCTTGCTGATGACCTCTTTGCCGCCTACTTTGGAC
CTGGTTCTTCTCGGCGGTTCCGAGCAGCCTTAGGTGAGGTGTCTCGTGCCAATGCAGCCCAGGACTTCCT
GCCAACTTCCAGGAATGACCCCGACCTGCACTTTGATGCTGAGCGACTGGGTCAGGGACGCGCGCGCCTG
GTAGGGGCTCTGCGGGAGACCGTGGTGGCAGCCAGGGCCCTTGACCACACCCTGGCTCGCCAGCGCCTCG
GGGCTGCACTTCATGCCCTGCAGGATTTCTACAGTCATAGCAACTGGGTGGAGCTGGGCGAGCAGCAGCC
ACACCCTCACCTCCTCTGGCCAAGGCAGGAGCTCCAGAACCTGGCACAAGTGGCCGATCCTACCTGCTCC
GATTGCGAGGAGTTGAGCTGCCCCAGGAATTGGCTGGGCTTCACACTCCTCACCTCTGGCTACTTTGGAA
CTCATCCCCCGAAACCTCCAGGGAAATGTAGCCACGGGGGCCATTTTGACCGGAGCAGCTCCCAGCCACC
GAGGGGAGGCATCAACAAGGACAGCACATCCCCAGGCTTCTCCCCTCACCACATGCTGCACCTCCAGGCT
GCAAAACTGGCCCTTCTAGCCTCCATCCAGGCCTTCAGCCTTCTGCGAAGCCGCCTGGGAGACAGGGATT
TCTCCAGGCTGCTGGACATCACCCCAGCCTCCAGCCTGAGCTTTGTCCTGGACACCACGGGCAGCATGGG
TGAGGAGATCAACGCTGCCAAAATCCAGGCTCGCCACCTTGTGGAGCAGCGGAGAGGCAGCCCCATGGAG
CCTGTCCACTATGTCCTGGTGCCTTTTCATGACCCAGGGTTCGGCCCTGTCTTTACAACCAGTGACCCTG
ACAGCTTCTGGCAACAGCTTAATGAGATCCATGCCTTGGGGGGTGGAGACGAGCCTGAGATGTGCCTGTC
AGCCCTGCAGCTGGCCCTGCTGCACACACCTCCACTCTCAGATATCTTTGTCTTCACGGATGCCTCCCCC
AAGGATGCCTTTCTCACCAACCAGGTGGAATCCCTGACTCAGGAGCGGCGCTGCCGGGTAACATTCCTGG
TGACTGAAGATACATCAAGGGTTCAGGGTCGAGCTCGGCGTGAGATCTTGTCCCCTCTGCGTTTTGAGCC
ATACAAAGCAGTGGCCCTGGCCTCAGGAGGAGAGGTGATCTTCACCAAAGACCAGCACATTCGAGACGTG
GCAGCCATTGTTGGGGAGAGCATGGCTGCCCTGGTGACTCTTCCCCTGGACCCTCCTGTTGTGGTGCCTG
GGCAGCCACTTGTGTTCAGCGTGGATGGGCTGCTCCAGAAGATCACAGTCCGGATCCACGGAGACATCAG
CAGCTTCTGGATCAAGAACCCTGCAGGGGTCTCCCAGGGCCAGGAGGAAGGCGGGGGTCCTCTAGGTCAC
ACTCGCCGCTTTGGGCAGTTCTGGATGGTGACCATGGATGACCCTCCACAGACAGGAACCTGGGAGATCC
AGGTCACAGCTGAGGACACCCCTGGGGTGAGAGTGCAAGCCCAGACCTCCCTGGACTTCCTCTTCCACTT
TGGGATCCCCATGGAGGATGGACCCCACCCTGGCCTCTACCCCCTGACTCAGCCAGTTGCAGGTCTTCAG
ACCCAGCTGCTGGTAGAAGTGACAGGGTTGGGTTCCAGAGCCAATCCTGGGGATCCTCAGCCGCATTTCT
CCCACGTCATCCTTCGAGGGGTCCCAGAGGGTGCCGAACTAGGCCAGGTGCCCTTGGAGCCCGTGGGACC
TCCGGAGCGAGGTCTCCTCGCAGCCTCGCTGTCGCCCACGCTGCTGTCCACCCCTAGACCCTTCTCCCTG
GAGCTGATTGGCCAGGACGCAGCGGGGCGGCGCCTGCACAGGGCTGCCCCTCAGCCTAGCACTGTAGTCC
CTGTCCTTCTGGAGCTTAGTGGCCCCTCGGGTTTCTTGGCCCCGGGCAGCAAAGTCCCGCTCAGTCTCCG
CATCGCCAGCTTCTCGGGCCCTCAGGATCTTGACCTTAGGACTTTCGTCAACCCCAGCTTCTCCCTCACC
TCCAACCTCTCCAGGGCTCACCTGGAACTGAATGAGTCGGCCTGGGGCCGCCTGTGGCTGGAGGTCCCAG
ATTCAGCGGCCCCGGATTCCGTGGTGATGGTGACTGTGACTGCAGGGGGACGAGAAGCCAACCCAGTACC
CCCGACTCATGCTTTCCTCCGGCTCCTGGTATCGGCCCCAGCCCCGCAGGACCGGCACACCACCCCTACC
GGCTCATCTGACCCGATCCTCACCACGGCCACCCCTGCCTTTTCCCCCTTCACATTGGTGACTCAAGGCA
GGGCTGGGGCAGGGCTGGCTGCGGGCAGCCCCTGGTGGGGCACAGTTGGAGGGGTGCTGCTTCTGCTAGG
CCTGGCCTCCTGGTGA

Translation (891 aa):
MLPTEVPQSHPGPSALLLLQLLLPPTSAFFPNIWSLLAAPGSITHQDLTEEAALNVTLQLFLEQPPPGRP
PLRLEDFLGRTLLADDLFAAYFGPGSSRRFRAALGEVSRANAAQDFLPTSRNDPDLHFDAERLGQGRARL
VGALRETVVAARALDHTLARQRLGAALHALQDFYSHSNWVELGEQQPHPHLLWPRQELQNLAQVADPTCS
DCEELSCPRNWLGFTLLTSGYFGTHPPKPPGKCSHGGHFDRSSSQPPRGGINKDSTSPGFSPHHMLHLQA
AKLALLASIQAFSLLRSRLGDRDFSRLLDITPASSLSFVLDTTGSMGEEINAAKIQARHLVEQRRGSPME
PVHYVLVPFHDPGFGPVFTTSDPDSFWQQLNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASP
KDAFLTNQVESLTQERRCRVTFLVTEDTSRVQGRARREILSPLRFEPYKAVALASGGEVIFTKDQHIRDV
AAIVGESMAALVTLPLDPPVVVPGQPLVFSVDGLLQKITVRIHGDISSFWIKNPAGVSQGQEEGGGPLGH
TRRFGQFWMVTMDDPPQTGTWEIQVTAEDTPGVRVQAQTSLDFLFHFGIPMEDGPHPGLYPLTQPVAGLQ
TQLLVEVTGLGSRANPGDPQPHFSHVILRGVPEGAELGQVPLEPVGPPERGLLAASLSPTLLSTPRPFSL
ELIGQDAAGRRLHRAAPQPSTVVPVLLELSGPSGFLAPGSKVPLSLRIASFSGPQDLDLRTFVNPSFSLT
SNLSRAHLELNESAWGRLWLEVPDSAAPDSVVMVTVTAGGREANPVPPTHAFLRLLVSAPAPQDRHTTPT
GSSDPILTTATPAFSPFTLVTQGRAGAGLAAGSPWWGTVGGVLLLLGLASW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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