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Report for CCDS20767.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20767.1 Public Mus musculus 7 Vmn1r65 23 108 98 CCDS HistoryNCBI Gene:81013Re-query CCDS DB by CCDS ID:20767.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20767.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000086338.1 ENSMUSP00000083520.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000086338.1Link to Ensembl Protein Viewer:ENSMUSP00000083520.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000086338Re-query CCDS DB by Protein ID:ENSMUSP00000083520
Original member Current member NCBI NM_030738.2 NP_109663.1 Accepted alive Link to Nucleotide Sequence:NM_030738.2Link to Protein Sequence:NP_109663.1Re-query CCDS DB by Nucleotide ID:NM_030738Re-query CCDS DB by Protein ID:NP_109663Link to BLAST:NP_109663.1

Chromosomal Locations for CCDS 20767.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 6008235 6009233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (999 nt):
ATGGTCATTACTCCATTGTGCAATGAAGCCATCTCCACGTTGTCTCAAAATAAAATAATGAGGACAACAG
AAGAAGTGGCTCTTCAGATTCTTTTGCTTTGCCAAGCTGGGGTTGGAATTCTGGGCAACATCCTACTGTT
TCTTCATAATTTCTCTCCAATTTTGACTGACTCACAACTGAGGCCCATTCAGATCATCCAAACAAACTTA
GCTGTGGCCAATACCTTCATTCTCCTCTTCTTGACATTTCCAAACCATATGGCAGTTTTGGCTCCAAGGA
AGCCTCCAACTGACCTCAAATGTAAACTTGCATACTTCTTTCACATGGTGGCTCGAAGCACAAACATGTG
CTCCACCTGTGTCCTCAGCACCTACCAGTTTGTCACTCTTGTTCCTGGTACCTGGGCTAGGGTCATCTTC
AGAGAAATATCCCCCAAGGTTGTGAGCTATTCTTGTTACAGTTGCTGGTTGTTCAGTGTCTTAAATAATG
CTTATATCCCAATGAATGTTAGTGGTCCTCAGAAAACAGATAATGGCACTGATTCTAAAGGTAAGTGGGT
CTGCTCAACTTCTGGTTTCAATGTTGGCATGAGCTTCTTACAGTTTGCCCAGGATATTATTTTTATCAGC
ACCATGATCTGGACCAGTGTCTCCATAGTGCTTCACCTGAACAGACACCACCAGAGAATGCACTACATAC
ATAATACCAGTCAGAAGTTCAGAGCCTATGCTGAGACCAGAGCAGCCCATACTGTCCTGATGCTGGTAGT
CACATTCGTGAGCTTTTATCTTCTAGACTGCATTTGTACTTTCTTTCACATTTCTTTTGTGAACACTCGT
TTCTGGTTGAGGCATGTCAAAGAAGTTCTGACTGTAAGCTTCCCCACTATTTCTCCCTTACTGTTGATCT
TTAGGGATCCTATGTGTCCTTGTCCTGTACCCTTCATTGTGGGGCTACAAAGCCGTGTCACTGGGATATC
CAGTCTGGAGCAAGAGTGA

Translation (332 aa):
MVITPLCNEAISTLSQNKIMRTTEEVALQILLLCQAGVGILGNILLFLHNFSPILTDSQLRPIQIIQTNL
AVANTFILLFLTFPNHMAVLAPRKPPTDLKCKLAYFFHMVARSTNMCSTCVLSTYQFVTLVPGTWARVIF
REISPKVVSYSCYSCWLFSVLNNAYIPMNVSGPQKTDNGTDSKGKWVCSTSGFNVGMSFLQFAQDIIFIS
TMIWTSVSIVLHLNRHHQRMHYIHNTSQKFRAYAETRAAHTVLMLVVTFVSFYLLDCICTFFHISFVNTR
FWLRHVKEVLTVSFPTISPLLLIFRDPMCPCPVPFIVGLQSRVTGISSLEQE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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