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Report for CCDS37463.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37463.1 Public Mus musculus 17 Zfp51 23 108 98 CCDS HistoryNCBI Gene:22709Re-query CCDS DB by CCDS ID:37463.1Re-query CCDS DB by GeneID:22709See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37463.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000039577.7 ENSMUSP00000045684.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000039577.7Link to Ensembl Protein Viewer:ENSMUSP00000045684.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000039577Re-query CCDS DB by Protein ID:ENSMUSP00000045684
Original member Current member NCBI NM_001308323.1 NP_001295252.1 Accepted alive Link to Nucleotide Sequence:NM_001308323.1Link to Protein Sequence:NP_001295252.1Re-query CCDS DB by Nucleotide ID:NM_001308323Re-query CCDS DB by Protein ID:NP_001295252Link to BLAST:NP_001295252.1
Original member Current member NCBI NM_009558.4 NP_033584.3 Accepted alive Link to Nucleotide Sequence:NM_009558.4Link to Protein Sequence:NP_033584.3Re-query CCDS DB by Nucleotide ID:NM_009558Re-query CCDS DB by Protein ID:NP_033584Link to BLAST:NP_033584.3

Chromosomal Locations for CCDS 37463.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 21452500 21452527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 21456297 21456388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 21461661 21461787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 21463372 21465470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2346 nt):
ATGGAGGAGACAGTCACTAAGGATCCAGCATCACAAGCTGGAGAGTCATTGTACCTGAAAGAGAAATTCA
AAGAAGATAAACAGAAAGAAATGGCTTATTCACCAGTAAACATGCCCCAGGGTCTGTTGACATTCAGGGA
TGTGGCTGTGGACTTCCCTCAGGAGGAGTGGGAATGCCTGGACTCTGATCAGAGGGCTCTGTACATTGAT
GTGATGTTGGAGAATTACAGAAACCTGGTCTCTGTCGAGAACTACTGCATATGTGATACAGTCCATCAAC
ATGTAAAGACTGAAAAGGAGTCTTGTCAGGGTAATAAACTTGGTGAAATGCTTCATGAACCCTCCAACTG
TGCCCTTTATAATAGAAGTGACACTACAGAAGCCTCTAACAAATTCCGATGCTGTAACAACGAGGATGTC
TCTGTTGACTCGTCAAATCAAAATAGATATAAAAGCACGCATACTGGAGAAGAACCTTGTGAGTCTAAAG
ACTGTGAGAAATCTTTAACTTTGTGTTCTGACATTAGTCAGGATCAAAGACTCTACAACGCAAAACAGCA
CAGACAGGAAGTATACGATGACTATTTCAGCTCTGCATACAGTCTCATGCAACCAACAGCCTACATTAAA
GAGAAACCACACCAGTGTGGCAAATGTGGGAAATGCTTCAATACCTCCTCAAGCCTCACTGTCCATCACA
GAATTCATACTAAAGAGAAACCCTACAAGTGCAGTGTCTGTGACAAATCCTTTACCCAGTGCACACATCT
TAAAATACATCAAAGACGTCATACTGGGGAAAAACCTTACAAATGCAAAGAATGTGAAAAATCATTTGTT
CAGTTGTCAGCACTTAAAAGTCATCAGAAATTGCATACTGGAGAGAAGCCTTACAAATGCAAGGAATGTG
ACAAATCCTTTGCCCATTATCCCAATTTCAGGACACATCAGAAAATCCATACTTCAGAGGAACATTGTAG
TTGTCCAGAATGTGGCAGGGAATTTCACCAGCTTTCACACCTTAGAAAACATTACAGACTCCATACTGGA
GAGAAGCCTTACAAATGCAATGAGTGTGACAGATCCTTTACCCACTATGCATCATTAAGATGGCATCAGA
AAACTCATACTCCAGAGATACATTATGAATGCAAAGAATGTGGTAAGTCCTTTATTGAATTATCACATCT
TAAAAGGCATTACAGAATCCACACTGGTGAAAAGCCTTATAAGTGTGAGATATGTGACAAGTCCTTTACT
ACGACCACAACTCTTAAAACACATCAGAAAATCCACACTGGAGAGAAACCTTACAAATGTAGAGAATGTG
ACAAATCTTTTATTCATAGTTCACATCTTAGAAGACATCAGAATGTTCATACTGGAGAGAGACCTTACAG
ATGTAAGGAATGTGACAAATCTTTTCATGAGAGCGCCACTCTTAGAGAACATGAGAAAAGTCATACTGGA
GAGAAAACTTACAAATGTAGAGAATGTGACAAATCCTTTACCCAGCGTGCATATCTTAGAAATCATCATA
ACAGAGTTCATACTGGAGAGAGACCTTATGAATGTAAGGAATGTGGCAAATCTTTTACTACCTGCTCAAC
TCTTAGAATACATCAGACAATTCATACTGGAAAGAAACCCTACAAGTGTATAGAATGTGGTAAATCCTTT
ACCAATAATTCATATCTTAGAACACATCAGAAAGTTCATTCTGGAGAGAAACCTTACAGATGTAAGGAAT
GTGACAAATCTTTTACTAGCTGTTCAACTCTAAAAGCACATCAGAATATTCATACTGGAGAGAAACCTTA
CAAATGTATAGAATGTGACAAATCCTTTACCCAGGTCTCACATCTTAGAACACATCAGAGAGTTCATACT
GGAGAGAGACCTTTCAGATGTACAGAATGTGACAAATCTTTTATTAGGTCTTCTCACCTTAGAGAACATC
AGAAAATTCATAGTGGAGAGAAACCTTACAAATGCAGAGACTGTGACATATCATTTAGCCAGATTTCAAA
TCTCAGAAGACATCAGAAACTTCATACTGGTGAGAAACCTTACAAATGTATGGAATGTGACAAGTCCTTT
ACTCATAACTCAAATTTTAGAACACATCAGAGAGTTCATACTGGAGAGAAACCTTATAGATGTGCCGAAT
GTGACAAATCTTTTACTAGGTGCTCCTACCTTAGAGCCCATCAGAAAATTCATACTGGAGAGAAACCTTA
CAAATGTATGGAATATGACAAACCCAATACCCAGGACTCAAATCTTAAAAGACATCAAAGAGTTCATACT
GGAGTGAAACATACCTTTTTAAATAATGTAACATAG

Translation (781 aa):
MEETVTKDPASQAGESLYLKEKFKEDKQKEMAYSPVNMPQGLLTFRDVAVDFPQEEWECLDSDQRALYID
VMLENYRNLVSVENYCICDTVHQHVKTEKESCQGNKLGEMLHEPSNCALYNRSDTTEASNKFRCCNNEDV
SVDSSNQNRYKSTHTGEEPCESKDCEKSLTLCSDISQDQRLYNAKQHRQEVYDDYFSSAYSLMQPTAYIK
EKPHQCGKCGKCFNTSSSLTVHHRIHTKEKPYKCSVCDKSFTQCTHLKIHQRRHTGEKPYKCKECEKSFV
QLSALKSHQKLHTGEKPYKCKECDKSFAHYPNFRTHQKIHTSEEHCSCPECGREFHQLSHLRKHYRLHTG
EKPYKCNECDRSFTHYASLRWHQKTHTPEIHYECKECGKSFIELSHLKRHYRIHTGEKPYKCEICDKSFT
TTTTLKTHQKIHTGEKPYKCRECDKSFIHSSHLRRHQNVHTGERPYRCKECDKSFHESATLREHEKSHTG
EKTYKCRECDKSFTQRAYLRNHHNRVHTGERPYECKECGKSFTTCSTLRIHQTIHTGKKPYKCIECGKSF
TNNSYLRTHQKVHSGEKPYRCKECDKSFTSCSTLKAHQNIHTGEKPYKCIECDKSFTQVSHLRTHQRVHT
GERPFRCTECDKSFIRSSHLREHQKIHSGEKPYKCRDCDISFSQISNLRRHQKLHTGEKPYKCMECDKSF
THNSNFRTHQRVHTGEKPYRCAECDKSFTRCSYLRAHQKIHTGEKPYKCMEYDKPNTQDSNLKRHQRVHT
GVKHTFLNNVT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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