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Report for CCDS32973.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32973.1 Public Homo sapiens 19 ZNF93 24 110 108 CCDS HistoryNCBI Gene:81931Re-query CCDS DB by CCDS ID:32973.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32973.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343769.6 ENSP00000342002.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000343769.6Link to Ensembl Protein Viewer:ENSP00000342002.4Re-query CCDS DB by Nucleotide ID:ENST00000343769Re-query CCDS DB by Protein ID:ENSP00000342002
Original member Current member NCBI NM_031218.4 NP_112495.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031218.4Link to Protein Sequence:NP_112495.2Re-query CCDS DB by Nucleotide ID:NM_031218Re-query CCDS DB by Protein ID:NP_112495Link to BLAST:NP_112495.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_112495.2 620 P35789-1 620 100% 0 0

Chromosomal Locations for CCDS 32973.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 19901089 19901091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19915280 19915406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19916560 19916655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19933182 19934818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1863 nt):
ATGGGACCATTGCAATTTAGAGATGTGGCCATAGAATTCTCTCTGGAGGAGTGGCATTGCCTGGACACTG
CACAGCGGAATCTATATAGGAATGTGATGTTAGAGAACTACAGTAACCTGGTCTTCCTTGGTATTGTTGT
CTCTAAGCCAGACCTGATCGCCCATCTGGAGCAAGGAAAAAAACCTTTGACTATGAAGAGACATGAGATG
GTAGCCAACCCCTCAGTTATATGTTCTCATTTTGCCCAAGATCTTTGGCCAGAGCAGAACATAAAAGATT
CTTTCCAAAAAGTGATACTGAGAAGATATGAAAAACGTGGACATGGAAATTTACAGTTAATAAAAAGGTG
TGAAAGTGTAGATGAGTGTAAGGTGCACACAGGAGGTTATAATGGACTTAACCAGTGTAGTACAACTACC
CAGAGCAAAGTATTTCAATGTGATAAATATGGGAAAGTCTTTCATAAATTTTCAAATTCAAATAGACATA
ATATAAGACATACTGAAAAAAAACCTTTCAAATGCATAGAATGTGGCAAAGCTTTTAACCAGTTCTCAAC
CCTTATAACACATAAGAAAATTCATACTGGAGAGAAACCCTACATTTGTGAAGAATGTGGCAAAGCCTTT
AAGTACTCCTCTGCCCTTAATACACATAAGAGAATTCATACTGGAGAGAAACCATACAAGTGTGATAAAT
GTGACAAAGCCTTTATTGCATCCTCAACCCTTAGTAAACATGAGATCATTCATACTGGAAAGAAACCCTA
CAAGTGTGAAGAATGTGGCAAAGCTTTTAACCAATCCTCGACACTTACTAAACATAAGAAAATTCATACT
GGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAACCAATCCTCAACACTTACTAAACATA
AGAAAATTCATACTGGAGAGAAGCCCTACGTTTGTGAAGAATGTGGCAAAGCCTTTAAGTACTCCCGTAT
CCTTACTACACATAAGAGAATTCATACTGGAGAGAAACCATACAAGTGTAATAAATGTGGCAAAGCCTTT
ATTGCATCCTCAACCCTTAGTAGACATGAGTTCATTCATATGGGAAAGAAACATTACAAATGTGAAGAAT
GTGGCAAAGCCTTCATTTGGTCCTCAGTCCTAACTAGACATAAGAGAGTTCATACTGGAGAGAAGCCCTA
CAAATGTGAAGAATGTGGCAAAGCCTTTAAGTACTCCTCTACCCTTAGTTCACATAAGAGAAGTCATACT
GGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTGTTGCATCCTCAACCCTTAGTAAACATG
AGATCATTCATACTGGAAAGAAACCCTACAAGTGTGAAGAATGTGGCAAAGCTTTTAACCAGTCCTCATC
CCTTACTAAACATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTT
AACCAGTCCTCTTCCCTTACTAAACATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAAT
GTGGCAAAGCTTTTAACCAGTCCTCAACCCTTATTAAACATAAGAAAATTCATACTAGAGAGAAACCCTA
CAAATGTGAAGAATGTGGCAAAGCTTTTCACCTATCCACACACCTTACTACACATAAGATACTTCATACT
GGAGAGAAACCTTATAGATGTAGAGAATGTGGCAAAGCTTTTAACCATTCTGCAACCCTTTCTTCACATA
AGAAAATCCATTCTGGAGAGAAACCATACGAGTGTGATAAATGTGGCAAAGCCTTTATTTCACCCTCAAG
CCTTAGTAGACATGAGATAATTCATACTGGGGAGAAACCCTAG

Translation (620 aa):
MGPLQFRDVAIEFSLEEWHCLDTAQRNLYRNVMLENYSNLVFLGIVVSKPDLIAHLEQGKKPLTMKRHEM
VANPSVICSHFAQDLWPEQNIKDSFQKVILRRYEKRGHGNLQLIKRCESVDECKVHTGGYNGLNQCSTTT
QSKVFQCDKYGKVFHKFSNSNRHNIRHTEKKPFKCIECGKAFNQFSTLITHKKIHTGEKPYICEECGKAF
KYSSALNTHKRIHTGEKPYKCDKCDKAFIASSTLSKHEIIHTGKKPYKCEECGKAFNQSSTLTKHKKIHT
GEKPYKCEECGKAFNQSSTLTKHKKIHTGEKPYVCEECGKAFKYSRILTTHKRIHTGEKPYKCNKCGKAF
IASSTLSRHEFIHMGKKHYKCEECGKAFIWSSVLTRHKRVHTGEKPYKCEECGKAFKYSSTLSSHKRSHT
GEKPYKCEECGKAFVASSTLSKHEIIHTGKKPYKCEECGKAFNQSSSLTKHKKIHTGEKPYKCEECGKAF
NQSSSLTKHKKIHTGEKPYKCEECGKAFNQSSTLIKHKKIHTREKPYKCEECGKAFHLSTHLTTHKILHT
GEKPYRCRECGKAFNHSATLSSHKKIHSGEKPYECDKCGKAFISPSSLSRHEIIHTGEKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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