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Report for CCDS13753.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13753.1 Public Homo sapiens 22 DGCR6 24 110 108 CCDS HistoryNCBI Gene:8214Re-query CCDS DB by CCDS ID:13753.1See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13753.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331444.12 ENSP00000331681.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331444.12Link to Ensembl Protein Viewer:ENSP00000331681.6Re-query CCDS DB by Nucleotide ID:ENST00000331444Re-query CCDS DB by Protein ID:ENSP00000331681
Original member Current member NCBI NM_005675.6 NP_005666.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005675.6Link to Protein Sequence:NP_005666.2Re-query CCDS DB by Nucleotide ID:NM_005675Re-query CCDS DB by Protein ID:NP_005666Link to BLAST:NP_005666.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005666.2 220 Q14129-1 220 100% 0 0

Chromosomal Locations for CCDS 13753.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 18906375 18906484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18906565 18906725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18910172 18910272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18910888 18911028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 18911540 18911689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (663 nt):
ATGGAGCGCTACGCGGGCGCCTTGGAGGAGGTGGCGGACGGTGCCCGGCAGCAGGAGCGACACTACCAGC
TGCTGTCGGCGTTACAGAGCCTGGTGAAGGAGTTGCCCAGCTCATTCCAGCAGCGCTTGTCCTACACCAC
GCTGAGCGACCTGGCCCTGGCGCTTCTCGACGGCACCGTGTTCGAAATCGTGCAGGGGCTACTGGAGATC
CAGCACCTCACCGAAAAGAGCCTGTACAACCAGCGCCTGCGCCTACAGAACGAGCATCGAGTGCTCAGGC
AGGCGCTGCGGCAGAAGCACCAGGAAGCCCAGCAGGCCTGCCGGCCCCATAACCTGCCTGTGCTTCAGGC
GGCTCAGCAGCGAGAACTAGAGGCGGTGGAGCACCGGATCCGTGAGGAGCAGCGGGCGATGGACCAGAAG
ATCGTCCTGGAGCTGGACCGGAAGGTGGCTGACCAGCAGAGCACACTGGAGAAGGCGGGGGTGGCTGGCT
TCTACGTGACCACCAACCCACAGGAGCTGATGCTGCAGATGAACCTGCTGGAACTCATCCGGAAGCTGCA
GCAGAGGGGCTGCTGGGCAGGGAAGGCAGCCCTGGGGCTAGGAGGTCCCTGGCAGTTGCCTGCTGCCCAG
TGTGACCAGAAAGGCAGCCCTGTCCCACCATAG

Translation (220 aa):
MERYAGALEEVADGARQQERHYQLLSALQSLVKELPSSFQQRLSYTTLSDLALALLDGTVFEIVQGLLEI
QHLTEKSLYNQRLRLQNEHRVLRQALRQKHQEAQQACRPHNLPVLQAAQQRELEAVEHRIREEQRAMDQK
IVLELDRKVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQRGCWAGKAALGLGGPWQLPAAQ
CDQKGSPVPP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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