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Report for CCDS39992.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39992.1 Public Mus musculus 7 Wdr93 23 108 98 CCDS HistoryNCBI Gene:626359Re-query CCDS DB by CCDS ID:39992.1Re-query CCDS DB by GeneID:626359See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39992.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000035622.7 ENSMUSP00000037467.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000035622.7Link to Ensembl Protein Viewer:ENSMUSP00000037467.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000035622Re-query CCDS DB by Protein ID:ENSMUSP00000037467
Original member Current member NCBI NM_001037927.1 NP_001033016.1 Accepted alive Link to Nucleotide Sequence:NM_001037927.1Link to Protein Sequence:NP_001033016.1Re-query CCDS DB by Nucleotide ID:NM_001037927Re-query CCDS DB by Protein ID:NP_001033016Link to BLAST:NP_001033016.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001033016.1 695 Q402B2 695 100% 0 0

Chromosomal Locations for CCDS 39992.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 79749120 79749419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79749965 79750157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79752448 79752512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79755933 79756011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79758410 79758525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79761460 79761498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79766390 79766425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79768359 79768443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79769341 79769512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79770978 79771048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79771517 79771603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79772401 79772520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79773353 79773566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79775512 79775575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79776630 79776786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79777113 79777305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79785716 79785812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2088 nt):
ATGTCATCTTTTAAAGGAAACCAGGCTCAGAAACGCAGGTTGTCTGTGTTTCCCAAGGGACCACTGGAGA
TTCCATCTCCAACTGAGGCAGACTGGCCTAAGGATGACGAAAAGGATTTTGTCTTCAAGGACTTGGATCA
AGAGCTGGATTCCCTTCCTCAGCCCTATCGAATGATAAACAAACTGGTGGACCATCTGTTTAACCGGTCA
TGGGAAATTATTGAAGAAAGAGACTCCTTAAGGGAAGTTGAGAAGAACTGGATCGTGCCCGCCATCTACC
ATCCAGTTGCAGAAATCCAGCTCGACAAAATGCCTGGTGGTATGGCTGTTTCACATGACTATCTGTTTAT
TGGAGGCCTTAAAGGATTCTCAATCTATAATCTGCACAATTGCAAAAGAATATATGTTTTGGAGAAGTTT
AAGGCTGATGTTATTTCCATCTGGGCCACAGATTTGGGAAATGACGTACTTATTGTTCCTATCGACGAAA
TGGGTATTGTGAGATTGTTTTACCTGTGTAAGGACAGTCTTTATCACATCAAGGCCATCAATGAAGTGGA
TGATAGCAGCAAGCAGAGCACCTGTCTGAAGATGGAAATCTCTCAGAACGGGGACTTTGCAGCTTTCCTC
TTCCAAGGAGCCGGGGATGTCTGGCTGGAAGTGTATAAGTTGCCCAAGGAGATTTGGCTAAAGGAAATGG
AGCACCCCCAATCGACTCTAAATCAAAAGAAAAAAGCCAAACAGCTGCAACTGAGCACTCCTGACTCTGC
TGTTACAGAAAGCATAGAAACGAGCTCGGGACCAAGTGTCAGCTCTAACTCAGTCCAGGACTTAAATATT
TCTTTTAAAAGTGACTTAAAGTTGAGTCTTCCAGTTTTTGTAATGAAGATTAAACCCCCTAAGCCCATAG
CAGGGACCACATTTAAAAGCCCCTTGGAAGTTTTTGCAAAGGTAGAGGACTACGTGGGGCTCGGCTCTGG
GCAGAATCACTTTATCAAGGATGTGCAGTGGGAGCAACACATGGAGACCTTCTATGCCTCCTACAAGAAG
CACCTGGAAGGGGAGTGGGAAGAGGAGCCACTCAGTATGGCCACCTTCCATTTCTTCTATACTAACTCCT
TAACAACCATGTCAATGGATGTCAAGAGCTCTTCAGGAATAGCATGTGTCCTTGGCATACACTGGAATGG
ACGTCACAACCTCTTCTTCTATTCCCTGAACAAAACTCAGAAGGATAAAACTGAGTATGAGAACGTATGG
CCCTGTGCTGCGCCCATTGTAATGTCTCAGATCAGCAGCTTCTCCTCCTACCTGGCCCTCGTCTGTGAGG
ATGGTGTGCTCATTTTGTGGGACCTGGCTGAAGGATTCCTCTTTGGGGTGGTTGCTCTGCCTGAGGGCTG
TTTCTGCCAGAGCATCCACTTCCTCCGATTCTTCCTGGTGCACGAAGGACAGAACGTGTACCCTGACTAC
CCAGTGAAGTTTGAGGTTATGTGTGTGGTGCTGTGCACTGATGCTTCCCTCCACCTGGTGACAGCCAGCG
GGACCCAAGGACCCACCAGCAAGGTGCTTGTTGGCAGGCCTGTGATGCACATGGAAGAAGCTATTTGTGC
CGTGGCCCCAGTCCCAGCCTTGCCTGGCATGGTGCTAATCTTTTCCAGGAGCCAATCTGTAACCCTCATG
GACGTGGCCAAGGCTGAGGTCCTCTGTGCCTTTTCGGCCCCGACATGCCACCCGCAGGCGCTGCCCTGGA
AGCCACTGTTTGCTGTATCTCCACACCATCCATATTTTCTGCTTCACGGAGCCCATCCACATGGTCAGAC
CACGTCTACTGAAGATCCCAAGAAGAGCACAGATTCTGTTTTCTATTTTAATTTTGAGGACTACCTGCTC
TTGAAAGATATCTCCAAAAAGTGTACCATTTCTCAAATGGCTGTGAACTTCTCCCAGATGTTGCCAGTGG
AGAAAAGATGTGAGCAGGTCTTCCAGAAGAGCATCCAGATGACAAAGACCCAGATGAAAGGGCGGGAGCA
GTGGTCCAGGCTGCGGAAGTACTCCATCATGCTCCAGAAAGAACTCTTAAAGAGGTGA

Translation (695 aa):
MSSFKGNQAQKRRLSVFPKGPLEIPSPTEADWPKDDEKDFVFKDLDQELDSLPQPYRMINKLVDHLFNRS
WEIIEERDSLREVEKNWIVPAIYHPVAEIQLDKMPGGMAVSHDYLFIGGLKGFSIYNLHNCKRIYVLEKF
KADVISIWATDLGNDVLIVPIDEMGIVRLFYLCKDSLYHIKAINEVDDSSKQSTCLKMEISQNGDFAAFL
FQGAGDVWLEVYKLPKEIWLKEMEHPQSTLNQKKKAKQLQLSTPDSAVTESIETSSGPSVSSNSVQDLNI
SFKSDLKLSLPVFVMKIKPPKPIAGTTFKSPLEVFAKVEDYVGLGSGQNHFIKDVQWEQHMETFYASYKK
HLEGEWEEEPLSMATFHFFYTNSLTTMSMDVKSSSGIACVLGIHWNGRHNLFFYSLNKTQKDKTEYENVW
PCAAPIVMSQISSFSSYLALVCEDGVLILWDLAEGFLFGVVALPEGCFCQSIHFLRFFLVHEGQNVYPDY
PVKFEVMCVVLCTDASLHLVTASGTQGPTSKVLVGRPVMHMEEAICAVAPVPALPGMVLIFSRSQSVTLM
DVAKAEVLCAFSAPTCHPQALPWKPLFAVSPHHPYFLLHGAHPHGQTTSTEDPKKSTDSVFYFNFEDYLL
LKDISKKCTISQMAVNFSQMLPVEKRCEQVFQKSIQMTKTQMKGREQWSRLRKYSIMLQKELLKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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