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Report for CCDS42334.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42334.1 Public Homo sapiens 17 KRTAP9-8 24 110 108 CCDS HistoryNCBI Gene:83901Re-query CCDS DB by CCDS ID:42334.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42334.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254072.7 ENSP00000254072.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000254072.7Link to Ensembl Protein Viewer:ENSP00000254072.6Re-query CCDS DB by Nucleotide ID:ENST00000254072Re-query CCDS DB by Protein ID:ENSP00000254072
Original member Current member NCBI NM_031963.3 NP_114169.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031963.3Link to Protein Sequence:NP_114169.2Re-query CCDS DB by Nucleotide ID:NM_031963Re-query CCDS DB by Protein ID:NP_114169Link to BLAST:NP_114169.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114169.2 159 Q9BYQ0 159 100% 0 0

Chromosomal Locations for CCDS 42334.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 41238052 41238531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (480 nt):
ATGACCCACTGTTGTTCCCCTTGCTGTCAGCCTACGTGCTGCAGGACCACCTGCTGGAAGCCCACCACTG
TGACCACCTGCAGCAGCACACCCTGCTGCCAGCCCTCCTGCTGTGTGTCCAGCTGCTGCCAGCCTTGCTG
CCGCCCAACTTGCTGTCAAAACACCTGCTGCCAGCCCATCTGTGTGACCAGCTGCTGCCAGCCTTCCTGC
TGCAGCACACCCTGCTGTCAGCCCACCTGCTGTGGCCAAACCAGCTGTGGGTCCAGCTGTGGTCAGAGCA
GCTCCTGTGCACCTGTGTACTGCAGAAGAACCTGCTACCACCCCACGACTGTCTGCCTGCCTGGTTGCCT
AAACCAGAGCTGTGGCTCCAACTGCTGCCAGCCCTGCTGCCGCCCAGCCTGCTGTGAGACCACCTGCTGC
AGGACCACTTGCTTCCAGCCCACCTGTGTGTCCAGCTGCTGCCAGCCTTCTTGCTGCTGA

Translation (159 aa):
MTHCCSPCCQPTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPTCCQNTCCQPICVTSCCQPSC
CSTPCCQPTCCGQTSCGSSCGQSSSCAPVYCRRTCYHPTTVCLPGCLNQSCGSNCCQPCCRPACCETTCC
RTTCFQPTCVSSCCQPSCC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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