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Report for CCDS13582.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13582.1 Public Homo sapiens 21 RWDD2B 24 110 108 CCDS HistoryNCBI Gene:10069Re-query CCDS DB by CCDS ID:13582.1Re-query CCDS DB by GeneID:10069See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13582.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000493196.2 ENSP00000418693.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000493196.2Link to Ensembl Protein Viewer:ENSP00000418693.1Re-query CCDS DB by Nucleotide ID:ENST00000493196Re-query CCDS DB by Protein ID:ENSP00000418693
Original member Current member NCBI NM_016940.3 NP_058636.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016940.3Link to Protein Sequence:NP_058636.1Re-query CCDS DB by Nucleotide ID:NM_016940Re-query CCDS DB by Protein ID:NP_058636Link to BLAST:NP_058636.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058636.1 319 P57060 319 100% 0 0

Chromosomal Locations for CCDS 13582.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 29006417 29006651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29007761 29008123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29008240 29008307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29008395 29008621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29019211 29019277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (960 nt):
ATGAAAATTGAGCTGTCCATGCAGCCATGGAACCCGGGTTACAGCAGTGAGGGGGCCACGGCTCAAGAAA
CTTACACATGTCCAAAAATGATTGAGATGGAGCAGGCGGAGGCCCAGCTTGCTGAGTTAGACCTGCTAGC
CAGTATGTTCCCTGGTGAGAATGAGCTCATAGTGAATGACCAGCTGGCTGTAGCAGAACTGAAAGATTGT
ATTGAAAAGAAGACAATGGAGGGGCGATCTTCAAAAGTCTACTTTACTATCAATATGAACCTGGATGTAT
CTGACGAAAAAATGGCGATGTTTTCTCTGGCCTGTATTCTTCCCTTTAAATACCCGGCAGTTCTGCCTGA
AATTACTGTCAGATCAGTATTATTGAGTAGATCCCAGCAGACTCAGCTGAACACAGATCTGACTGCATTC
CTGCAAAAACATTGTCATGGAGATGTTTGTATACTGAATGCCACAGAGTGGGTTAGAGAACACGCCTCTG
GCTATGTCAGCAGAGATACTTCATCTTCACCCACCACAGGAAGCACAGTCCAGTCAGTTGACCTCATCTT
CACGAGACTCTGGATCTACAGCCATCATATCTATAACAAATGCAAAAGAAAGAATATTCTAGAGTGGGCA
AAGGAGCTTTCCCTGTCTGGGTTTAGCATGCCTGGAAAACCTGGTGTTGTTTGTGTGGAAGGCCCACAAA
GTGCCTGTGAAGAATTCTGGTCAAGACTCAGAAAATTAAACTGGAAGAGAATTTTAATTCGCCATCGAGA
AGACATTCCTTTTGATGGTACAAATGATGAAACGGAAAGACAAAGGAAATTTTCCATTTTTGAAGAAAAA
GTGTTCAGTGTTAATGGAGCCAGGGGAAACCACATGGACTTTGGTCAGCTCTATCAGTTCTTAAACACCA
AAGGATGTGGGGATGTTTTCCAGATGTTCTTTGGTGTAGAAGGACAATGA

Translation (319 aa):
MKIELSMQPWNPGYSSEGATAQETYTCPKMIEMEQAEAQLAELDLLASMFPGENELIVNDQLAVAELKDC
IEKKTMEGRSSKVYFTINMNLDVSDEKMAMFSLACILPFKYPAVLPEITVRSVLLSRSQQTQLNTDLTAF
LQKHCHGDVCILNATEWVREHASGYVSRDTSSSPTTGSTVQSVDLIFTRLWIYSHHIYNKCKRKNILEWA
KELSLSGFSMPGKPGVVCVEGPQSACEEFWSRLRKLNWKRILIRHREDIPFDGTNDETERQRKFSIFEEK
VFSVNGARGNHMDFGQLYQFLNTKGCGDVFQMFFGVEGQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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