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Report for CCDS6702.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6702.2 Public Homo sapiens 9 CARD19 24 110 108 CCDS HistoryNCBI Gene:84270Re-query CCDS DB by CCDS ID:6702.2See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 6702.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375464.7 ENSP00000364613.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375464.7Link to Ensembl Protein Viewer:ENSP00000364613.2Re-query CCDS DB by Nucleotide ID:ENST00000375464Re-query CCDS DB by Protein ID:ENSP00000364613
Original member Current member NCBI NM_032310.5 NP_115686.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032310.5Link to Protein Sequence:NP_115686.3Re-query CCDS DB by Nucleotide ID:NM_032310Re-query CCDS DB by Protein ID:NP_115686Link to BLAST:NP_115686.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115686.3 183 Q96LW7-2 183 100% 0 0

Chromosomal Locations for CCDS 6702.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 93096346 93096352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93107674 93107816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93110568 93110721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93111879 93111938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93112218 93112289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93112992 93113107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (552 nt):
ATGACAGATCAGACCTATTGTGACCGCCTGGTGCAGGACACGCCTTTCCTGACAGGCCATGGGCGCTTGA
GTGAGCAGCAGGTGGACAGGATCATCCTCCAGCTGAACCGTTACTACCCACAGATCCTTACCAACAAGGA
GGCGGAAAAGTTCCGGAACCCCAAGGCATCCTTGCGTGTGCGGCTCTGTGACCTCCTGAGCCACCTGCAG
CGGAGCGGTGAGCGGGACTGCCAGGAGTTCTACCGAGCCCTGTATATCCATGCCCAGCCCCTGCACAGCC
GCCTGCCCAGCCGCCACGCTCTGCAGAACTCAGATTGCACAGAGCTAGACTCGGGCAGCCAGAGCGGCGA
GCTGAGTAACAGGGGACCCATGAGCTTCCTGGCTGGCCTGGGCCTTGCTGTGGGACTGGCCCTGCTCCTG
TACTGCTATCCGCCAGACCCCAAGGGCCTGCCAGGGACCCGGCGCGTCCTCGGTTTCTCGCCTGTCATCA
TCGACAGACATGTCAGCCGCTACCTGCTGGCCTTCCTGGCAGATGACCTAGGGGGGCTCTGA

Translation (183 aa):
MTDQTYCDRLVQDTPFLTGHGRLSEQQVDRIILQLNRYYPQILTNKEAEKFRNPKASLRVRLCDLLSHLQ
RSGERDCQEFYRALYIHAQPLHSRLPSRHALQNSDCTELDSGSQSGELSNRGPMSFLAGLGLAVGLALLL
YCYPPDPKGLPGTRRVLGFSPVIIDRHVSRYLLAFLADDLGGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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