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Report for CCDS44137.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44137.1 Public Homo sapiens 1 AGBL4 24 110 108 CCDS HistoryNCBI Gene:84871Re-query CCDS DB by CCDS ID:44137.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44137.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371839.6 ENSP00000360905.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371839.6Link to Ensembl Protein Viewer:ENSP00000360905.1Re-query CCDS DB by Nucleotide ID:ENST00000371839Re-query CCDS DB by Protein ID:ENSP00000360905
Original member Current member NCBI NM_032785.4 NP_116174.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032785.4Link to Protein Sequence:NP_116174.3Re-query CCDS DB by Nucleotide ID:NM_032785Re-query CCDS DB by Protein ID:NP_116174Link to BLAST:NP_116174.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116174.3 503 Q5VU57-1 503 100% 0 0

Chromosomal Locations for CCDS 44137.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 48534173 48534293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 48534890 48534916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 48539642 48539738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 48587004 48587166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 48590833 48590985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 48634493 48634604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 48653337 48653451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 48663152 48663241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 48867191 48867230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 49045584 49045800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 49245770 49245864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 49697313 49697437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 49851396 49851518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 50023763 50023796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1512 nt):
ATGGCGGAGGGGAGCCAGTCGGCGCCTGAGGCAGGCAATGATATGGGAAATGATGATGCCATTGGAGGGA
ATGTGAGCAAATATATAGTGCTTCCAACTGGCTATTGTGGACAGCCCAAGAAAGGACATCTTATCTTTGA
TGCTTGCTTTGAAAGTGGTAACCTGGGCCGGGTGGACCAGGTCTCTGAGTTTGAGTATGATCTGTTCATT
AGGCCGGACACCTGTAATCCACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAATGTGAAAGAATCAC
AGAGGGTCATTTTCAACATTGTTAACTTCAGTAAAACCAAGAGTCTCTATAGAGATGGGATGGCCCCTAT
GGTGAAATCTACCAGCAGACCAAAATGGCAAAGGCTGCCACCCAAAAATGTTTACTACTACCGCTGCCCG
GACCATAGGAAGAACTATGTGATGTCCTTTGCCTTTTGTTTTGACCGAGAAGAAGATATTTACCAGTTTG
CTTACTGCTACCCATATACATACACTCGCTTCCAACATTACCTTGACAGCCTGCAAAAGAGAAACATGGA
TTACTTCTTTCGGGAGCAGCTGGGCCAGAGTGTGCAACAACGAAAGCTTGACCTCCTGACGATAACCAGC
CCTGACAATCTCCGGGAAGGGGCAGAGCAGAAGGTGGTATTCATCACAGGACGAGTCCACCCAGGGGAAA
CACCCTCATCATTTGTGTGCCAAGGGATCATTGACTTCCTTGTAAGCCAGCACCCTATTGCCTGTGTCCT
CCGGGAATACCTGGTCTTCAAGATCGCACCAATGCTCAATCCTGATGGAGTCTACCTGGGCAATTACAGG
TGTTCTCTGATGGGATTTGATCTGAATCGTCACTGGCTGGATCCCTCTCCATGGGTCCATCCTACCCTGC
ATGGAGTGAAACAACTCATCGTCCAGATGTACAACGACCCAAAAACAAGCCTGGAGTTTTATATTGACAT
CCATGCCCACTCCACCATGATGAATGGCTTCATGTATGGCAACATCTTTGAGGATGAGGAACGGTTCCAG
AGGCAGGCCATTTTTCCCAAGCTCCTCTGCCAGAATGCTGAGGACTTCTCCTATTCCAGCACATCCTTTA
ACCGGGACGCTGTGAAAGCAGGAACTGGCCGTCGCTTCCTCGGTGGACTCCTGGACCACACTTCCTATTG
CTACACCCTAGAGGTCTCCTTCTACAGCTACATCATCAGTGGCACCACGGCTGCTGTGCCCTACACTGAA
GAAGCCTATATGAAGCTGGGGCGGAATGTGGCAAGAACCTTTTTGGACTATTATCGGCTGAACCCCGTGG
TTGAAAAGGTGGCAATTCCCATGCCGAGACTGCGAAATAAAGAAATAGAAGTCCAGAGAAGGAAAGAAAA
ATCCCCTCCTTACAAGCACCCACTCCTGCGGGGCCCAGCCAGCAACTACCCCAACAGCAAAGGGGACAAG
AAGAGCTCAGTGAACCACAAAGACCCTTCAACCCCTTTTTAA

Translation (503 aa):
MAEGSQSAPEAGNDMGNDDAIGGNVSKYIVLPTGYCGQPKKGHLIFDACFESGNLGRVDQVSEFEYDLFI
RPDTCNPRFRVWFNFTVENVKESQRVIFNIVNFSKTKSLYRDGMAPMVKSTSRPKWQRLPPKNVYYYRCP
DHRKNYVMSFAFCFDREEDIYQFAYCYPYTYTRFQHYLDSLQKRNMDYFFREQLGQSVQQRKLDLLTITS
PDNLREGAEQKVVFITGRVHPGETPSSFVCQGIIDFLVSQHPIACVLREYLVFKIAPMLNPDGVYLGNYR
CSLMGFDLNRHWLDPSPWVHPTLHGVKQLIVQMYNDPKTSLEFYIDIHAHSTMMNGFMYGNIFEDEERFQ
RQAIFPKLLCQNAEDFSYSSTSFNRDAVKAGTGRRFLGGLLDHTSYCYTLEVSFYSYIISGTTAAVPYTE
EAYMKLGRNVARTFLDYYRLNPVVEKVAIPMPRLRNKEIEVQRRKEKSPPYKHPLLRGPASNYPNSKGDK
KSSVNHKDPSTPF


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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