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Report for CCDS12928.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12928.1 Public Homo sapiens 19 FIZ1 24 110 108 CCDS HistoryNCBI Gene:84922Re-query CCDS DB by CCDS ID:12928.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12928.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000221665.5 ENSP00000221665.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000221665.5Link to Ensembl Protein Viewer:ENSP00000221665.2Re-query CCDS DB by Nucleotide ID:ENST00000221665Re-query CCDS DB by Protein ID:ENSP00000221665
Original member Current member NCBI NM_032836.3 NP_116225.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032836.3Link to Protein Sequence:NP_116225.2Re-query CCDS DB by Nucleotide ID:NM_032836Re-query CCDS DB by Protein ID:NP_116225Link to BLAST:NP_116225.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116225.2 496 Q96SL8 496 100% 0 0

Chromosomal Locations for CCDS 12928.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 55592450 55593646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55597572 55597865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1491 nt):
ATGGATGACGTCCCCGCCCCAACCCCTGCACCAGCACCGCCCGCCGCTGCCGCCCCCAGGGTCCCGTTTC
ACTGCAGTGAATGTGGCAAGAGCTTCCGCTACCGCTCAGACCTGCGGCGCCACTTTGCCCGGCACACAGC
GCTCAAGCCCCACGCATGTCCGCGCTGCGGCAAGGGTTTCAAGCACAGCTTCAACCTAGCCAACCACCTG
CGCTCGCACACCGGGGAGCGGCCCTACCGCTGCTCTGCCTGCCCCAAGGGGTTCCGCGACTCCACCGGCC
TGCTGCACCACCAGGTCGTCCACACTGGTGAGAAACCCTACTGCTGCCTGGTCTGCGAGCTCCGCTTCTC
CTCACGCTCCAGCCTGGGCCGCCACCTCAAGCGCCAGCACCGTGGGGTTCTCCCCTCTCCCCTGCAGCCC
GGCCCTGGCCTGCCCGCCTTGAGTGCGCCCTGCTCCGTCTGCTGCAATGTGGGGCCCTGCTCGGTGTGCG
GGGGCTCAGGGGCCGGCGGCGGAGAGGGCCCCGAGGGGGCAGGCGCGGGTCTGGGCAGCTGGGGGCTGGC
AGAGGCGGCAGCTGCGGCCGCGGCCTCCTTGCCCCCATTTGCGTGCGGCGCCTGCGCGCGGCGCTTCGAC
CACGGCCGCGAGCTGGCGGCCCACTGGGCGGCGCACACCGACGTGAAGCCCTTCAAGTGCCCGCGCTGCG
AGCGCGACTTCAACGCGCCCGCGCTGCTGGAGCGGCACAAGCTGACGCACGACCTGCAGGGCCCGGGCGC
GCCCCCAGCGCAGGCCTGGGCCGCGGGGCCAGGCGCAGGGCCCGAGACGGCGGGCGAAGGCACCGCTGCG
GAGGCGGGCGACGCTCCTCTGGCTTCGGACCGCAGGCTGCTCCTGGGCCCCGCGGGGGGCGGCGTGCCCA
AGCTCGGGGGGCTGCTCCCCGAGGGCGGTGGGGAGGCGCCTGCACCTGCGGCGGCCGCCGAGCCCTCGGA
AGACACCCTGTACCAGTGCGACTGCGGGACCTTCTTTGCGTCGGCCGCGGCCCTGGCCAGTCACCTGGAG
GCCCACTCGGGCCCGGCCACCTACGGCTGCGGCCACTGCGGGGCTCTGTACGCGGCGCTGGCCGCCTTGG
AGGAGCACCGGCGGGTCAGCCACGGTGAGGGCGGCGGGGAGGAGGCGGCGACCGCCGCCCGGGAAAGGGA
ACCGGCGTCCGGGGAACCCCCGTCTGGCTCCGGCCGCGGCAAGAAGATCTTCGGCTGCTCCGAGTGCGAG
AAGCTGTTCCGCTCACCGCGAGACCTGGAGCGGCACGTGCTGGTGCACACTGGCGAGAAGCCGTTCCCGT
GCCTGGAGTGCGGCAAGTTCTTCCGCCACGAGTGCTACCTCAAGCGCCACCGGCTGCTGCACGGCACCGA
GCGGCCCTTCCCTTGCCACATCTGCGGCAAGGGCTTCATCACGCTCAGCAACCTCTCCAGGCACCTGAAG
CTGCACCGGGGCATGGACTGA

Translation (496 aa):
MDDVPAPTPAPAPPAAAAPRVPFHCSECGKSFRYRSDLRRHFARHTALKPHACPRCGKGFKHSFNLANHL
RSHTGERPYRCSACPKGFRDSTGLLHHQVVHTGEKPYCCLVCELRFSSRSSLGRHLKRQHRGVLPSPLQP
GPGLPALSAPCSVCCNVGPCSVCGGSGAGGGEGPEGAGAGLGSWGLAEAAAAAAASLPPFACGACARRFD
HGRELAAHWAAHTDVKPFKCPRCERDFNAPALLERHKLTHDLQGPGAPPAQAWAAGPGAGPETAGEGTAA
EAGDAPLASDRRLLLGPAGGGVPKLGGLLPEGGGEAPAPAAAAEPSEDTLYQCDCGTFFASAAALASHLE
AHSGPATYGCGHCGALYAALAALEEHRRVSHGEGGGEEAATAAREREPASGEPPSGSGRGKKIFGCSECE
KLFRSPRDLERHVLVHTGEKPFPCLECGKFFRHECYLKRHRLLHGTERPFPCHICGKGFITLSNLSRHLK
LHRGMD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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