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Report for CCDS14719.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14719.1 Public Homo sapiens X PNMA6A 24 110 108 CCDS HistoryNCBI Gene:84968Re-query CCDS DB by CCDS ID:14719.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14719.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000421798.5 ENSP00000391488.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000421798.5Link to Ensembl Protein Viewer:ENSP00000391488.3Re-query CCDS DB by Nucleotide ID:ENST00000421798Re-query CCDS DB by Protein ID:ENSP00000391488
Original member Current member NCBI NM_032882.6 NP_116271.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032882.6Link to Protein Sequence:NP_116271.3Re-query CCDS DB by Nucleotide ID:NM_032882Re-query CCDS DB by Protein ID:NP_116271Link to BLAST:NP_116271.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116271.3 399 P0CW24 399 100% 0 0

Chromosomal Locations for CCDS 14719.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 153073063 153074262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1200 nt):
ATGGCGGTGACCATGCTGCAGGACTGGTGCCGGTGGATGGGGGTCAACGCTCGCAGGGGCCTGCTCATCC
TGGGCATCCCGGAGGACTGTGATGATGCCGAATTCCAAGAGTCCCTCGAGGCTGCCCTGAGGCCTATGGG
ACACTTTACAGTGCTAGGCAAAGCGTTTCGAGAGGAGGATAATGCCACCGCGGCCCTGGTCGAGCTCGAC
CGGGAAGTCAACTATGCTTTGGTCCCCAGGGAAATCCCCGGCACTGGGGGCCCGTGGAACGTGGTCTTTG
TGCCCCGTTGCTCAGGCGAGGAGTTTCTCGGTCTCGGTCGCGTGTTCCACTTCCCGGAGCAAGAGGGGCA
GATGGTGGAGAGCGTGGCCGGCGCCCTGGGTGTGGGGCTGCGCAGGGTGTGCTGGCTGCGATCCATCGGT
CAGGCGGTCCAGCCCTGGGTGGAGGCCGTGAGGTGCCAGAGCCTGGGCGTGTTTTCCGGGAGGGACCAGC
CAGCCCCAGGGGAGGAGTCCTTTGAGGTCTGGCTAGACCACACCACCGAAATGCTGCATGTGTGGCAGGG
GGTCTCGGAAAGGGAGAGGAGGAGGAGGCTGCTGGAAGGCTTGCGTGGGACCGCCCTGCAGCTCGTGCAC
GCGCTCCTGGCGGAGAACCCCGCCAGGACGGCGCAGGACTGTCTGGCGGCCCTGGCCCAGGTGTTTGGAG
ACAACGAGTCCCAGGCGACCATCCGGGTGAAGTGTCTGACCGCTCAGCAGCAGTCAGGCGAGCGTCTCTC
AGCTTTCGTGTTGCGGCTGGAAGTGCTGCTGCAGAAGGCCATGGAGAAGGAGGCCCTGGCCAGAGCATCC
GCCGACCGCGTGCGCCTGAGGCAGATGCTCACCAGGGCCCACCTTACTGAGCCTCTGGATGAAGCACTGA
GGAAGCTGAGAATGGCCGGGAGGTCTCCAAGTTTCTTGGAGATGCTGGGGCTCGTTCGGGAGTCTGAGGC
ATGGGAGGCCAGTCTAGCCAGGAGCGTGAGAGCCCAGACACAGGAAGGGGCCGGTGCCCGGGCTGGTGCC
CAGGCTGTTGCCAGAGCCAGCACTAAAGTAGAGGCGGTCCCAGGAGGTCCTGGTCGGGAGCCAGAGGGCC
TCCTCCAGGCAGGAGGCCAGGAGGCTGAGGAGCTCCTCCAGGAGGGGCTCAAGCCCGTCCTGGAGGAATG
TGATAACTAG

Translation (399 aa):
MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREEDNATAALVELD
REVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVESVAGALGVGLRRVCWLRSIG
QAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVH
ALLAENPARTAQDCLAALAQVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARAS
ADRVRLRQMLTRAHLTEPLDEALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGA
QAVARASTKVEAVPGGPGREPEGLLQAGGQEAEELLQEGLKPVLEECDN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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