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Report for CCDS28916.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28916.1 Public Mus musculus 17 Acsbg2 23 108 98 CCDS HistoryNCBI Gene:328845Re-query CCDS DB by CCDS ID:28916.1Re-query CCDS DB by GeneID:328845See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 28916.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043062.4 ENSMUSP00000042352.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043062.4Link to Ensembl Protein Viewer:ENSMUSP00000042352.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000043062Re-query CCDS DB by Protein ID:ENSMUSP00000042352
Original member Current member NCBI NM_001039114.1 NP_001034203.1 Accepted alive Link to Nucleotide Sequence:NM_001039114.1Link to Protein Sequence:NP_001034203.1Re-query CCDS DB by Nucleotide ID:NM_001039114Re-query CCDS DB by Protein ID:NP_001034203Link to BLAST:NP_001034203.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034203.1 667 Q2XU92 667 100% 0 0

Chromosomal Locations for CCDS 28916.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 56845437 56845513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56846093 56846339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56846522 56846661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56847611 56847828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56849715 56849948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56850035 56850216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56853737 56853913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56856879 56857028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56861539 56861622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56862871 56862991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56864460 56864548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56868226 56868455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56872797 56872851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2004 nt):
ATGACTCAAGAGAAGAAGGCGGAAGACCTTGAGAGAGGCACAGACGCCACCTCAGCTGTTCCCAGGCTAT
GGAGCACCCACTGTGATGGAGAAGTGCTCCTGAGGTTGTCCAAACATGGTCCAGGCCATGAGACCCCGAT
GACCATCCCTGAGCTGTTCCAGGAATCTGCTGAGCGATTCAGTGCTTATCCGGCCCTAGCCTCAAAGAAC
GGCAAAAAGTGGGACACGCTGACATTCAGCCAGTACTATGAAATGTGTCGAAAGGCAGCCAAGTCTCTGA
TCAAGCTCGGCCTGCAGCGCTTCCAGTGTGTCGGCATCCTGGGCTTTAACTCGGTCGAGTGGGTCGTTAC
TGCTCTGGGCACTATCTTGGCTGGGGGCCTCTGTGTTGGTATTTATGCCACCAACTCGGCTGAGGCCTGC
CAGTACGTCATCCAGCAGGCCAACGTGAGTATCTTGATAGTGGAGAATGACCAACAGCTGCAGAAAATCC
TGTTGATTCCACCAGACAAGATGGAGACCGTGAAAGCCATTGTGCAGTACAAGCTGCCCTTGATGGAAAG
CATGGCAAACCTGTACTCATGGAATGACTTCATGGAGCTAGGGAATGACATCCCAAATATCCAGCTGGAT
CGGGTCATCCTGAGCCAGAAGGCCAACCAGTGTGCTGTCATCCTCTACACCTCTGGGACCACAGGGACCC
CCAAAGGCGTGCTGCTGAGCCATGACAATATCACATGGACGGCAGGGGCGATGTCGCAAGAGATGGAGAT
AAACCGAGTCTCAGGGAAGCAGAATACAATAGTCAGCTACCTGCCCCTCAGCCACATCGCAGCCCAGCTC
ACAGACATCTGGATCCCCATCAAGATTGGGGCACTCACTTTCTTTGCTCAACCAGATGCACTCAGGGGCA
CCTTGGTGTACACGCTTCAAGAAGTGAAGCCTACACTTTTCATGGGGGTGCCACGCATCTGGGAAAAGAT
GCAGGACACCATCAAGGAAAACGTGGCCAGGTCCTCCCGCCTGAGAAAGAAGGCATTTGCATGGGCGAAG
ATGCTTGGCTTGAAGGTCAACACCAAGCGGATGCTGGGGAAGCGAGACATCCCCATGAATTACCGCATGG
CAAAGGCCCTTGTGTTCGCGAAGGTCAGGACCTCCCTGGGCTTAGACAATTGCCACGCCTTCTTCAGCAG
CGCTTCGCCCCTCTCTCAGGATGTCTCAGAGTTCTTTCTCAGCCTGGACATCCCCATTGGTGAGATCTAC
GGGATGAGTGAGTGCTCCGGACCGCACACAGTCTCCAACAAGAGTGTCTACAGAGTTTTGAGCTGTGGCA
AGGTCCTGAGTGGCTGTAAGAACATGCTGTACAACCAGAACAAAGAAGGCGTGGGTGAGGTGTGCATGTG
GGGCCGGCATGTCTTCATGGGCTACCTGAACAAGGAGGAGGCCACATTGGAAGCACTGGATGAAAATGGC
TGGCTGCACTCTGGGGACATTGGCCGCCTGGACAGCCATGATTTCCTTTATATCACTGGCCGCATCAAAG
AAATCCTGATAACCGCTGGTGGTGAGAATGTATCCCCCATCCCCATTGAGACCCTGGTAAAGGAGAAGAT
CCCCATTATCAGCCACGCCATGCTGGTGGGCGACAAGGCCAAATTCCTGTGCATGCTGCTGACGCTGAAG
TGTGAAACAGACCGGAAGAGCGGAGAGCCCTTGAACAAGCTGAGCGTGGAGGCCAAAAGCTTCTGCCAGA
TGCTGGGTAGCCAAGCAACCACTGTGTCGGACATTTTGAAGAGTCGAGACCAAGTGGTCTACACGGCCAT
CCAATATGGCATAGACATCGTGAATCAGCAAGCGATGTCTGACTCACATAGAATCCGAAAGTGGATCATC
TTGGAGAAGGACTTTTCGATCCAGGGTGGGGAGCTGGGACCGACATCAAAACTTAAGAGAAGTGTGATAA
CCCAGAAATACAAAGCACAGATTGACAGCATGTACTTGTCATAA

Translation (667 aa):
MTQEKKAEDLERGTDATSAVPRLWSTHCDGEVLLRLSKHGPGHETPMTIPELFQESAERFSAYPALASKN
GKKWDTLTFSQYYEMCRKAAKSLIKLGLQRFQCVGILGFNSVEWVVTALGTILAGGLCVGIYATNSAEAC
QYVIQQANVSILIVENDQQLQKILLIPPDKMETVKAIVQYKLPLMESMANLYSWNDFMELGNDIPNIQLD
RVILSQKANQCAVILYTSGTTGTPKGVLLSHDNITWTAGAMSQEMEINRVSGKQNTIVSYLPLSHIAAQL
TDIWIPIKIGALTFFAQPDALRGTLVYTLQEVKPTLFMGVPRIWEKMQDTIKENVARSSRLRKKAFAWAK
MLGLKVNTKRMLGKRDIPMNYRMAKALVFAKVRTSLGLDNCHAFFSSASPLSQDVSEFFLSLDIPIGEIY
GMSECSGPHTVSNKSVYRVLSCGKVLSGCKNMLYNQNKEGVGEVCMWGRHVFMGYLNKEEATLEALDENG
WLHSGDIGRLDSHDFLYITGRIKEILITAGGENVSPIPIETLVKEKIPIISHAMLVGDKAKFLCMLLTLK
CETDRKSGEPLNKLSVEAKSFCQMLGSQATTVSDILKSRDQVVYTAIQYGIDIVNQQAMSDSHRIRKWII
LEKDFSIQGGELGPTSKLKRSVITQKYKAQIDSMYLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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