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Report for CCDS28916.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28916.1 Public Mus musculus 17 Acsbg2 23 108 98 CCDS HistoryNCBI Gene:328845Re-query CCDS DB by CCDS ID:28916.1Re-query CCDS DB by GeneID:328845See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 28916.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043062.4 ENSMUSP00000042352.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043062.4Link to Ensembl Protein Viewer:ENSMUSP00000042352.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000043062Re-query CCDS DB by Protein ID:ENSMUSP00000042352
Original member Current member NCBI NM_001039114.1 NP_001034203.1 Accepted alive Link to Nucleotide Sequence:NM_001039114.1Link to Protein Sequence:NP_001034203.1Re-query CCDS DB by Nucleotide ID:NM_001039114Re-query CCDS DB by Protein ID:NP_001034203Link to BLAST:NP_001034203.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034203.1 667 Q2XU92 667 100% 0 0

Chromosomal Locations for CCDS 28916.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 56845437 56845513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56846093 56846339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56846522 56846661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56847611 56847828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56849715 56849948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56850035 56850216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56853737 56853913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56856879 56857028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56861539 56861622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56862871 56862991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56864460 56864548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56868226 56868455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 56872797 56872851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2004 nt):
ATGACTCAAGAGAAGAAGGCGGAAGACCTTGAGAGAGGCACAGACGCCACCTCAGCTGTTCCCAGGCTAT
GG
AGCACCCACTGTGATGGAGAAGTGCTCCTGAGGTTGTCCAAACATGGTCCAGGCCATGAGACCCCGAT
G
ACCATCCCTGAGCTGTTCCAGGAATCTGCTGAGCGATTCAGTGCTTATCCGGCCCTAGCCTCAAAGAAC
GGC
AAAAAGTGGGACACGCTGACATTCAGCCAGTACTATGAAATGTGTCGAAAGGCAGCCAAGTCTCTGA
TC
AAGCTCGGCCTGCAGCGCTTCCAGTGTGTCGGCATCCTGGGCTTTAACTCGGTCGAGTGGGTCGTTAC
T
GCTCTGGGCACTATCTTGGCTGGGGGCCTCTGTGTTGGTATTTATGCCACCAACTCGGCTGAGGCCTGC
CAG
TACGTCATCCAGCAGGCCAACGTGAGTATCTTGATAGTGGAGAATGACCAACAGCTGCAGAAAATCC
TG
TTGATTCCACCAGACAAGATGGAGACCGTGAAAGCCATTGTGCAGTACAAGCTGCCCTTGATGGAAAG
C
ATGGCAAACCTGTACTCATGGAATGACTTCATGGAGCTAGGGAATGACATCCCAAATATCCAGCTGGAT
CGG
GTCATCCTGAGCCAGAAGGCCAACCAGTGTGCTGTCATCCTCTACACCTCTGGGACCACAGGGACCC
CC
AAAGGCGTGCTGCTGAGCCATGACAATATCACATGGACGGCAGGGGCGATGTCGCAAGAGATGGAGAT
A
AACCGAGTCTCAGGGAAGCAGAATACAATAGTCAGCTACCTGCCCCTCAGCCACATCGCAGCCCAGCTC
ACA
GACATCTGGATCCCCATCAAGATTGGGGCACTCACTTTCTTTGCTCAACCAGATGCACTCAGGGGCA
CC
TTGGTGTACACGCTTCAAGAAGTGAAGCCTACACTTTTCATGGGGGTGCCACGCATCTGGGAAAAGAT
G
CAGGACACCATCAAGGAAAACGTGGCCAGGTCCTCCCGCCTGAGAAAGAAGGCATTTGCATGGGCGAAG
ATG
CTTGGCTTGAAGGTCAACACCAAGCGGATGCTGGGGAAGCGAGACATCCCCATGAATTACCGCATGG
CA
AAGGCCCTTGTGTTCGCGAAGGTCAGGACCTCCCTGGGCTTAGACAATTGCCACGCCTTCTTCAGCAG
C
GCTTCGCCCCTCTCTCAGGATGTCTCAGAGTTCTTTCTCAGCCTGGACATCCCCATTGGTGAGATCTAC
GGG
ATGAGTGAGTGCTCCGGACCGCACACAGTCTCCAACAAGAGTGTCTACAGAGTTTTGAGCTGTGGCA
AG
GTCCTGAGTGGCTGTAAGAACATGCTGTACAACCAGAACAAAGAAGGCGTGGGTGAGGTGTGCATGTG
G
GGCCGGCATGTCTTCATGGGCTACCTGAACAAGGAGGAGGCCACATTGGAAGCACTGGATGAAAATGGC
TGG
CTGCACTCTGGGGACATTGGCCGCCTGGACAGCCATGATTTCCTTTATATCACTGGCCGCATCAAAG
AA
ATCCTGATAACCGCTGGTGGTGAGAATGTATCCCCCATCCCCATTGAGACCCTGGTAAAGGAGAAGAT
C
CCCATTATCAGCCACGCCATGCTGGTGGGCGACAAGGCCAAATTCCTGTGCATGCTGCTGACGCTGAAG
TGT
GAAACAGACCGGAAGAGCGGAGAGCCCTTGAACAAGCTGAGCGTGGAGGCCAAAAGCTTCTGCCAGA
TG
CTGGGTAGCCAAGCAACCACTGTGTCGGACATTTTGAAGAGTCGAGACCAAGTGGTCTACACGGCCAT
C
CAATATGGCATAGACATCGTGAATCAGCAAGCGATGTCTGACTCACATAGAATCCGAAAGTGGATCATC
TTG
GAGAAGGACTTTTCGATCCAGGGTGGGGAGCTGGGACCGACATCAAAACTTAAGAGAAGTGTGATAA
CC
CAGAAATACAAAGCACAGATTGACAGCATGTACTTGTCATAA


Translation (667 aa):
MTQEKKAEDLERGTDATSAVPRLWSTHCDGEVLLRLSKHGPGHETPMTIPELFQESAERFSAYPALASKN
G
KKWDTLTFSQYYEMCRKAAKSLIK
LGLQRFQCVGILGFNSVEWVVTALGTILAGGLCVGIYATNSAEAC
Q
YVIQQANVSILIVENDQQLQKILL
IPPDKMETVKAIVQYKLPLMESMANLYSWNDFMELGNDIPNIQLD
R
VILSQKANQCAVILYTSGTTGTPKGVLLSHDN
ITWTAGAMSQEMEINRVSGKQNTIVSYLPLSHIAAQL
T
DIWIPIKIGALTFFAQPDALR
GTLVYTLQEVKPTLFMGVPRIWEKMQDTIKENVARSSRLRKKAFAWAK
M
LGLKVNTKRML
GKRDIPMNYRMAKALVFAKVRTSLGLDNCHAFFSSASPLSQDVSEFFLSLDIPIGEIY
G
MSECSGPHTVSNKSVYRVL
SCGKVLSGCKNMLYNQNKEGVGEVCMWGRHVFMGYLNKEEATLEALDENG
W
LHSGDIGRLDSHDFLYITGRIK
EILITAGGENVSPIPIETLVKEKIPIISHAMLVGDKAKFLCMLLTLK
C
ETDRKSGEPLNKLSVEAKSFCQMLGSQATTVSDILKSRDQVVYTAIQYGIDIVNQQAMSDSHRIRKWII
L
EKDFSIQGGEL
GPTSKLKRSVITQKYKAQIDSMYLS



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser