NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS7557.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7557.1 Public Homo sapiens 10 ITPRIP 24 110 108 CCDS HistoryNCBI Gene:85450Re-query CCDS DB by CCDS ID:7557.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7557.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000278071.6 ENSP00000278071.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000278071.6Link to Ensembl Protein Viewer:ENSP00000278071.2Re-query CCDS DB by Nucleotide ID:ENST00000278071Re-query CCDS DB by Protein ID:ENSP00000278071
Original member Current member EBI ENST00000337478.3 ENSP00000337178.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000337478.3Link to Ensembl Protein Viewer:ENSP00000337178.1Re-query CCDS DB by Nucleotide ID:ENST00000337478Re-query CCDS DB by Protein ID:ENSP00000337178
Original member Current member EBI ENST00000358187.2 ENSP00000350915.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358187.2Link to Ensembl Protein Viewer:ENSP00000350915.2Re-query CCDS DB by Nucleotide ID:ENST00000358187Re-query CCDS DB by Protein ID:ENSP00000350915
Original member Current member EBI ENST00000647721.1 ENSP00000497746.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000647721.1Link to Ensembl Protein Viewer:ENSP00000497746.1Re-query CCDS DB by Nucleotide ID:ENST00000647721Re-query CCDS DB by Protein ID:ENSP00000497746
Original member Current member NCBI NM_001272012.2 NP_001258941.1 Accepted alive Link to Nucleotide Sequence:NM_001272012.2Link to Protein Sequence:NP_001258941.1Re-query CCDS DB by Nucleotide ID:NM_001272012Re-query CCDS DB by Protein ID:NP_001258941Link to BLAST:NP_001258941.1
Original member Current member NCBI NM_001272013.2 NP_001258942.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001272013.2Link to Protein Sequence:NP_001258942.1Re-query CCDS DB by Nucleotide ID:NM_001272013Re-query CCDS DB by Protein ID:NP_001258942Link to BLAST:NP_001258942.1
Original member Current member NCBI NM_033397.4 NP_203755.1 Accepted alive Link to Nucleotide Sequence:NM_033397.4Link to Protein Sequence:NP_203755.1Re-query CCDS DB by Nucleotide ID:NM_033397Re-query CCDS DB by Protein ID:NP_203755Link to BLAST:NP_203755.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258941.1 547 Q8IWB1 547 100% 0 0
NP_001258942.1 547 Q8IWB1 547 100% 0 0
NP_203755.1 547 Q8IWB1 547 100% 0 0

Chromosomal Locations for CCDS 7557.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 104314408 104316051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1644 nt):
ATGGCCATGGGGCTCTTCCGCGTGTGTCTGGTGGTGGTGACGGCCATCATCAACCACCCGCTGCTGTTCC
CGCGGGAGAACGCCACAGTCCCCGAGAACGAGGAGGAGATCATCCGCAAGATGCAGGCGCACCAGGAGAA
GCTGCAGCTGGAGCAGTTGCGCCTGGAGGAGGAGGTGGCTCGGCTGGCGGCCGAAAAGGAGGCACTGGAG
CAGGTGGCGGAGGAGGGCAGGCAGCAGAACGAGACACGCGTGGCCTGGGACCTCTGGAGCACCCTCTGCA
TGATCCTCTTCCTGATGATCGAGGTGTGGCGGCAGGACCACCAGGAGGGGCCCTCACCTGAGTGCCTGGG
CGGTGAGGAGGATGAGCTGCCTGGGCTGGGGGGCGCCCCCTTGCAGGGCCTCACCCTGCCCAACAAGGCC
ACGCTTGGCCACTTTTATGAGCGCTGCATCCGGGGGGCCACGGCCGATGCAGCCCGTACCCGGGAGTTCC
TGGAAGGCTTCGTGGATGACTTGCTGGAAGCCCTGAGGAGCCTCTGCAACCGGGACACCGACATGGAGGT
GGAGGACTTCATTGGCGTGGACAGCATGTACGAGAACTGGCAGGTGGACAGGCCACTGCTGTGCCACCTT
TTCGTGCCCTTCACACCCCCCGAGCCCTACCGCTTCCACCCAGAGCTCTGGTGCTCCGGCCGCTCAGTGC
CCCTGGATCGCCAGGGCTACGGCCAGATCAAGGTGGTCCGCGCCGATGGGGACACATTGAGCTGCATCTG
CGGCAAGACCAAGCTCGGGGAAGACATGCTGTGTCTCCTGCACGGCAGGAACAGCATGGCGCCTCCCTGC
GGCGACATGGAGAACCTGCTGTGTGCCACAGATTCCCTGTACCTGGACACGATGCAGGTCATGAAGTGGT
TCCAGACGGCCCTCACCAGAGCCTGGAAGGGCATCGCCCACAAGTACGAGTTCGACCTGGCCTTTGGCCA
GCTGGACAGCCCGGGGTCCCTGAAGATCAAGTTCCGTTCAGGGAAGTTCATGCCCTTCAACCTGATTCCT
GTGATCCAGTGTGATGACTCGGACCTGTACTTTGTCTCCCACCTTCCCAGGGAGCCCTCTGAGGGCACCC
CAGCCTCCAGCACAGACTGGCTCCTGTCCTTTGCTGTCTATGAGCGACACTTCCTCAGGACGACACTAAA
GGCACTGCCCGAGGGCGCCTGCCACCTCAGCTGCCTGCAGATAGCATCCTTCCTGCTCTCCAAGCAGAGC
CGCCTGACCGGTCCCAGCGGGCTCAGCAGCTACCACCTGAAGACGGCCCTACTGCACCTCCTACTCCTCC
GGCAGGCCGCCGACTGGAAGGCGGGGCAGCTGGACGCTCGTCTGCACGAGTTGCTGTGCTTCCTGGAGAA
GAGCTTGCTCCAGAAGAAGCTCCACCACTTCTTCATCGGCAACCGCAAGGTGCCTGAGGCCATGGGACTC
CCTGAGGCCGTGCTCAGGGCCGAGCCCCTCAACCTCTTCCGGCCCTTCGTCCTGCAGCGAAGCCTTTACC
GTAAGACACTGGACTCCTTCTATGAGATGCTCAAGAATGCCCCAGCGCTCATTAGCGAGTATTCCCTACA
TGTCCCCTCAGACCAGCCTACCCCAAAAAGCTGA

Translation (547 aa):
MAMGLFRVCLVVVTAIINHPLLFPRENATVPENEEEIIRKMQAHQEKLQLEQLRLEEEVARLAAEKEALE
QVAEEGRQQNETRVAWDLWSTLCMILFLMIEVWRQDHQEGPSPECLGGEEDELPGLGGAPLQGLTLPNKA
TLGHFYERCIRGATADAARTREFLEGFVDDLLEALRSLCNRDTDMEVEDFIGVDSMYENWQVDRPLLCHL
FVPFTPPEPYRFHPELWCSGRSVPLDRQGYGQIKVVRADGDTLSCICGKTKLGEDMLCLLHGRNSMAPPC
GDMENLLCATDSLYLDTMQVMKWFQTALTRAWKGIAHKYEFDLAFGQLDSPGSLKIKFRSGKFMPFNLIP
VIQCDDSDLYFVSHLPREPSEGTPASSTDWLLSFAVYERHFLRTTLKALPEGACHLSCLQIASFLLSKQS
RLTGPSGLSSYHLKTALLHLLLLRQAADWKAGQLDARLHELLCFLEKSLLQKKLHHFFIGNRKVPEAMGL
PEAVLRAEPLNLFRPFVLQRSLYRKTLDSFYEMLKNAPALISEYSLHVPSDQPTPKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH