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Report for CCDS15358.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15358.1 Public Mus musculus 1 Ivns1abp 23 108 98 CCDS HistoryNCBI Gene:117198Re-query CCDS DB by CCDS ID:15358.1Re-query CCDS DB by GeneID:117198See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15358.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000097543.7 ENSMUSP00000095150.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000097543.7Link to Ensembl Protein Viewer:ENSMUSP00000095150.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000097543Re-query CCDS DB by Protein ID:ENSMUSP00000095150
Original member Current member NCBI NM_001039512.1 NP_001034601.1 Accepted alive Link to Nucleotide Sequence:NM_001039512.1Link to Protein Sequence:NP_001034601.1Re-query CCDS DB by Nucleotide ID:NM_001039512Re-query CCDS DB by Protein ID:NP_001034601Link to BLAST:NP_001034601.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034601.1 600 Q920Q8-4 600 100% 0 0

Chromosomal Locations for CCDS 15358.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 151350999 151351109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151351554 151351723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151351830 151351905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151353920 151354093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151356129 151356236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151359622 151359751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151359953 151360177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151360718 151360839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151360932 151361058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151361143 151361274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151361462 151361635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151363112 151363365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1803 nt):
ATGATTCCCAATGGATATTTGATGTTTGAAGATGAAAATTTTATTGAATCATCTGTTGCCAAATTAAATG
CCTTGAGGAAGAGTGGGCAGTTCTGTGATGTTCGACTTCAGGTCTGTGGCCATGAGATGCTAGCACACAG
GGCAGTCCTGGCTTGCTGTAGCCCCTATCTATTTGAAATCTTCAATAGTGACAGTGACCCTCATGGAGTT
TCTCATGTGAAGTTGGATGATCTCAATCCAGAAGCTGTTGAAGTCTTGCTGAATTATGCATACACGGCTC
AGTTGAAAGCTGATAAGGAATTAGTAAAAGATGTTTATTCTGCAGCCAAGAAGCTGAAGATGGACCGAGT
CAAGCAGGTCTGCGGAGATTATTTACTATCTAGAATGGATGTTACTAGCTGCATCTCTTACCGAAATTTT
GCAAGTTGTATGGGAGACTCCCGTTTGTTGAATAAAGTTGACGCTTATATTCAGGAGCATTTGTTACAAA
TTTCAGAAGAGGAGGAATTTCTTAAGCTTCCGAGACTAAAGGTTCAAACCTTGTACTACTCAGCTGATCA
CAAGCTGCTTGATGGGAACCCACTAGATGGACAGGCTGAGGTGTTTGGCAGTGATGATGACCACATTCAG
TTTGTGCAGAAAAAGCCACCCCGTGAGAATGGCCATAAGCAGATAAGTGGCAGTTCCACTGGATGTCTCT
CTTCTCCAAATGCTTCAATGCAAAGCCCTAAGCATGAGTGGAAAATCGTTGCTTCAGAAAAGACTTCAAA
TAACACTTACTTGTGCCTGGCTGTGCTGGACAGTACATTCTGTGTCATTTTCCTTCATGGGCGGAACAGT
CCACAGAGCTCACCAACAAGTACTCCAAAACTGAGCAAGAGTTTAAGCTTCGAGATGCAACCAGATGAGC
TTCTAGAAAAGCCCATGTCTCCCATGCAGTACGCACGGTCTGGACTAGGGACAGCAGAGATGAATGGCAA
ACTCATAGCTGCAGGTGGTTATAACAGAGAGGAATGTCTTCGAACAGTTGAATGCTATGATCCACATACA
GATCACTGGTCCTTCCTTGCTCCCATGAGAACACCAAGAGCCCGCTTTCAAATGGCTGTGCTGATGGGAC
AGCTCTATGTGGTGGGTGGATCAAATGGACACTCAGATGACCTGAGTTGTGGAGAAATGTATGATCCAAA
CATTGATGACTGGACCCCTGTTCCAGAGCTGAGAACCAACCGTTGTAATGCAGGAGTGTGTGCTCTGAAT
GGGAAATTGTACATTGTTGGTGGCTCTGATCCATATGGTCAAAAGGGCCTGAAAAATTGTGATGTATTTG
ATCCTGTAACGAAGTCATGGACAAGCTGTGCTCCTCTTAACATTCGTCGACACCAGTCTGCAGTTTGTGA
ACTTGGTGGTTATTTGTATATAATTGGAGGTGCAGAATCTTGGAATTGTCTGAACACAGTAGAACGATAC
AATCCTGAAAACAACACCTGGACTTTAATTGCACCCATGAATGTGGCGAGGCGAGGGGCTGGAGTCGCTG
TGCTTGATGGAAAACTGTTTGTAGGTGGTGGCTTTGATGGTTCTCACGCCATCAGTTGTGTGGAGATGTA
TGATCCAACTAGAAATGAATGGAAGATGATGGGAAATATGACTTCACCAAGGAGCAATGCTGGGATCACA
ACTGTAGGGAATACCATTTATGCAGTGGGAGGATTCGATGGCAATGAGTTTCTGAATACTGTGGAAGTCT
ACAACCCTCAGTCAAATGAGTGGAGCCCTTACACAAAGATTTTCCAGTTTTAA

Translation (600 aa):
MIPNGYLMFEDENFIESSVAKLNALRKSGQFCDVRLQVCGHEMLAHRAVLACCSPYLFEIFNSDSDPHGV
SHVKLDDLNPEAVEVLLNYAYTAQLKADKELVKDVYSAAKKLKMDRVKQVCGDYLLSRMDVTSCISYRNF
ASCMGDSRLLNKVDAYIQEHLLQISEEEEFLKLPRLKVQTLYYSADHKLLDGNPLDGQAEVFGSDDDHIQ
FVQKKPPRENGHKQISGSSTGCLSSPNASMQSPKHEWKIVASEKTSNNTYLCLAVLDSTFCVIFLHGRNS
PQSSPTSTPKLSKSLSFEMQPDELLEKPMSPMQYARSGLGTAEMNGKLIAAGGYNREECLRTVECYDPHT
DHWSFLAPMRTPRARFQMAVLMGQLYVVGGSNGHSDDLSCGEMYDPNIDDWTPVPELRTNRCNAGVCALN
GKLYIVGGSDPYGQKGLKNCDVFDPVTKSWTSCAPLNIRRHQSAVCELGGYLYIIGGAESWNCLNTVERY
NPENNTWTLIAPMNVARRGAGVAVLDGKLFVGGGFDGSHAISCVEMYDPTRNEWKMMGNMTSPRSNAGIT
TVGNTIYAVGGFDGNEFLNTVEVYNPQSNEWSPYTKIFQF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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