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Report for CCDS80361.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80361.1 Public Mus musculus 5 P2rx2 23 108 98 CCDS HistoryNCBI Gene:231602Re-query CCDS DB by CCDS ID:80361.1Re-query CCDS DB by GeneID:231602See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80361.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000200214.1 ENSMUSP00000142567.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000200214.1Link to Ensembl Protein Viewer:ENSMUSP00000142567.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000200214Re-query CCDS DB by Protein ID:ENSMUSP00000142567
Original member Current member NCBI NM_001310701.1 NP_001297630.1 Accepted alive Link to Nucleotide Sequence:NM_001310701.1Link to Protein Sequence:NP_001297630.1Re-query CCDS DB by Nucleotide ID:NM_001310701Re-query CCDS DB by Protein ID:NP_001297630Link to BLAST:NP_001297630.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001297630.1 398 Q8K3P1-4 398 100% 0 0

Chromosomal Locations for CCDS 80361.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 110340193 110340582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110340668 110340733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110340856 110340949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110341101 110341231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110341551 110341689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110341774 110341854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110342005 110342101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110342178 110342253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110342333 110342404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110342500 110342550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1197 nt):
ATGTCGGAACACAAAGTGTGGGACGTGGAGGAATACGTAAAGCCCCCGGAGGGGGGCAGTGTAGTCAGCA
TCATCACCAGGATCGAGGTTACTCCTTCCCAGACCCTGGGAACATGCCCAGAGAGCATGAGGGTTCACAG
CTCTACCTGCCATTTAGATGACGACTGTGTGGCCGGACAGCTGGACATGCAGGGCAATGGGATTCGGACA
GGACGCTGTGTACCCTATTACCATGGGGACTCCAAGACCTGCGAGGTGTCAGCCTGGTGCCCGGTGGAGG
ATGGGACTTCTGAAAACCATTTTCTGGGTAAAATGGCCCCAAATTTCACCATCCTCATCAAGAACAGCAT
CCACTATCCCAAGTTCAAGTTCTCCAAGGGCAACATTGCAAGCCAGAAGAGTGACTACCTGAAGCACTGC
ACGTTTGATCAGGACTCTGATCCATACTGTCCCATCTTCAGGCTGGGCTTCATTGTAGAGCAAGCAGGAG
AGAACTTCACAGAACTGGCACACAAGGGCGGTGTCATTGGGGTCATCATCAACTGGAACTGTGACCTGGA
CTTGTCTGAATCAGAGTGCAACCCCAAATATTCTTTCCGGAGGCTCGACCCCAAGTATGACCCTGCCTCT
TCAGGCTACAACTTCAGGTTTGCCAAATATTACAAGATAAACGGCACCACCACCACTCGAACTCTCATCA
AAGCCTATGGGATTCGAATTGACGTTATTGTGCATGGACAGGCAGGGAAATTCAGTCTCATTCCCACCAT
CATCAATCTGGCCACTGCTCTGACCTCCATCGGGGTGGGCTCCTTTCTGTGTGACTGGATTTTGTTAACG
TTCATGAACAAAAACAAGCTCTACAGCCATAAGAAGTTCGACAAGGTGCGTACCCCAAGGCACCCCTCAA
GTAGATGGCCTGTGACCCTTGCCCTTGTCTTGGGCCAGATCCCTCCCCCACCTAGTCACTACTCCCAGGA
CCAGCCACCCAGCCTTCCATCAGGTGAAGGACCAGCTTTGGGAGAAGGGGCAGAGCTACCACTGGCTGTC
CAGCCTCCTCGGTCTTGCTCCAGCTCTGCTCTGACTGAGCAGGTGGTGGACACTCTTGACCAGCATATGG
GACAAAGGCCTCCTGTCCCTGAGCCTTCCCAACAGGACTCCACATCCACGGACCCCAAAGGTTTGGCCCA
ACTTTGA

Translation (398 aa):
MSEHKVWDVEEYVKPPEGGSVVSIITRIEVTPSQTLGTCPESMRVHSSTCHLDDDCVAGQLDMQGNGIRT
GRCVPYYHGDSKTCEVSAWCPVEDGTSENHFLGKMAPNFTILIKNSIHYPKFKFSKGNIASQKSDYLKHC
TFDQDSDPYCPIFRLGFIVEQAGENFTELAHKGGVIGVIINWNCDLDLSESECNPKYSFRRLDPKYDPAS
SGYNFRFAKYYKINGTTTTRTLIKAYGIRIDVIVHGQAGKFSLIPTIINLATALTSIGVGSFLCDWILLT
FMNKNKLYSHKKFDKVRTPRHPSSRWPVTLALVLGQIPPPPSHYSQDQPPSLPSGEGPALGEGAELPLAV
QPPRSCSSSALTEQVVDTLDQHMGQRPPVPEPSQQDSTSTDPKGLAQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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