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Report for CCDS81176.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81176.1 Public Mus musculus X Kir3dl1 23 108 98 CCDS HistoryNCBI Gene:245616Re-query CCDS DB by CCDS ID:81176.1Re-query CCDS DB by GeneID:245616See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81176.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113104.7 ENSMUSP00000108728.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113104.7Link to Ensembl Protein Viewer:ENSMUSP00000108728.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113104Re-query CCDS DB by Protein ID:ENSMUSP00000108728
Original member Current member NCBI NM_001310690.1 NP_001297619.1 Accepted alive Link to Nucleotide Sequence:NM_001310690.1Link to Protein Sequence:NP_001297619.1Re-query CCDS DB by Nucleotide ID:NM_001310690Re-query CCDS DB by Protein ID:NP_001297619Link to BLAST:NP_001297619.1

Chromosomal Locations for CCDS 81176.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 136518031 136518064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136518298 136518333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136526387 136526692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136529837 136530133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136531453 136531491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136533114 136533230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136533791 136533840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136533942 136534013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGCTGCTCTGGTTCCTCAGCCTCGTGTGTTCTGGTTTCTTCCTAGTCCAGAGGATGTCAGCACACTTGG
GAATCTACATGAAGCCTTTCCTCTTGATTCTACAAAGTCCCCTGGTGGATACAGGAGGGAATGTGACCCT
GGAATGTCACTCAGAGAATATGTTCGATACATACATTTTGATTTCACACAGAATGGGAATAATCAAGAAC
TCTGTCCAAGTTTCTGCAGAACATCATGAAAGTGGGTCACATGTCAGCTACTCAATAGGTCCCATGACAC
CTGACCTTGTTGGGACTTACACATGCTATGGTGCTAACAGTTACTACCCCTATGAATGGTCAGACTCCAG
TGACCCCATTGACATCAAGATCACAGGTATATACAAGAAACCTTCTCTGTCAGCCCTGATGGGCCCTGTG
CTGATGATGTCAGGAGAGACCATGACCCTGTCTTGCATCTCTGACCATCAGTTTGACACGTTCCATATGT
CCAGGGAAGGGGTGCCTCGGGGACAGGGGATGCCTGCAGTGCAGAGCCACAGTGGTAAATTCGAGGCAAA
ATTCCTTCTTAGTCCAATGATCCAAAAAGGGAACTATAGATGCTATGGCTCTTTCAGGAACGCTTCCCAT
GTGTGGTCCTCCCCAAGTGACCCCTTGTACCTTCCTGCCAAAGGAAACTGTCCTGCATACACAGAAGCAG
ATACCAAAACAAATAACTACAAGAACCTGCACATTCTAACTGGGCTCTTAGTAACCATGGTCCTTGTCGT
CATCATCATCTTTTACTCTTGTTACTTCTCCAAACAGAATAAGTCTCAGAAACAAGCAGCAGCCAGCATG
GAACAAGAGTATGAAGTTAAAAACACAATAAACACACAGGACTTTGAAAGACAAGAAGGACAGGGGTTAC
ATACACAGAACTTGAGCAGAGAATCTTCAACCAAAACTTGA

Translation (316 aa):
MLLWFLSLVCSGFFLVQRMSAHLGIYMKPFLLILQSPLVDTGGNVTLECHSENMFDTYILISHRMGIIKN
SVQVSAEHHESGSHVSYSIGPMTPDLVGTYTCYGANSYYPYEWSDSSDPIDIKITGIYKKPSLSALMGPV
LMMSGETMTLSCISDHQFDTFHMSREGVPRGQGMPAVQSHSGKFEAKFLLSPMIQKGNYRCYGSFRNASH
VWSSPSDPLYLPAKGNCPAYTEADTKTNNYKNLHILTGLLVTMVLVVIIIFYSCYFSKQNKSQKQAAASM
EQEYEVKNTINTQDFERQEGQGLHTQNLSRESSTKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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