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Report for CCDS49087.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49087.1 Public Mus musculus 12 Mnat1 23 108 98 CCDS HistoryNCBI Gene:17420Re-query CCDS DB by CCDS ID:49087.1Re-query CCDS DB by GeneID:17420See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49087.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021523.6 ENSMUSP00000021523.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021523.6Link to Ensembl Protein Viewer:ENSMUSP00000021523.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000021523Re-query CCDS DB by Protein ID:ENSMUSP00000021523
Original member Current member NCBI NM_008612.2 NP_032638.2 Accepted alive Link to Nucleotide Sequence:NM_008612.2Link to Protein Sequence:NP_032638.2Re-query CCDS DB by Nucleotide ID:NM_008612Re-query CCDS DB by Protein ID:NP_032638Link to BLAST:NP_032638.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032638.2 309 P51949 309 100% 0 0

Chromosomal Locations for CCDS 49087.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 73123838 73123926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 73168000 73168152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 73170594 73170667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 73179205 73179308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 73181784 73181924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 73188140 73188265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 73219021 73219142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 73272414 73272534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGACGACCAGGGCTGCCCCAGGTGTAAGACCACCAAGTACCGGAACCCTTCTTTGAAGCTGATGGTGA
ACGTGTGCGGACACACTCTGTGTGAGAGTTGTGTGGACTTACTGTTTGTAAGAGGAGCTGGAAACTGTCC
TGAGTGTGGGACTCCACTGAGAAAGAGCAACTTCAGGGTACAACTCTTTGAAGATCCCACTGTTGATAAG
GAGGTTGAAATTCGGAAAAAAGTACTAAAGATATACAATAAAAGGGAAGAAGATTTTCCTAGTTTAAGAG
AGTATAATGATTTTCTGGAAGAAGTGGAGGAAATCGTTTTCAATTTGACCAACAATGTGGATTTGGAGAA
CACTAAAAAGAAAATGGAAATATATCAAAAAGAAAACAAAGATGTCATTCAGAAAAACAAATTAAAGCTG
ACGCGGGAGCAGGAGGAGTTGGAGGAAGCATTGGAGGTAGAACGCCAAGAACATGAGCAGCGACGGCTGT
TCATACAAAAGGAAGAAGAGCTGCAGCAGGCTCTGAAAAGGAAGAACAAGCAGGCCTTTTTAGATGAGCT
GGAGAGCTCCGACCTCCCTGTTGCTCTGCTCCTGGCGCAGCATAAAGACAGATCGACCCAGCTGGAAATG
CAGCTCGAGAAGCCCAGATCCATGAAGCCAGTGACGTTTTCCACAGGAATTAAAATGGGTCAACAGATTT
CATTAGCACCAATCCAAAAGCTGGAAGAAGCTCTTTATGAGTACCAGCCCCTGCAGATAGAGACCTGTGG
CCCACAAGTTCCTGAGCAAGAGCTCTTAGGACGGCTTGGGTATTTAAACCACGTCCGGGCTGCATCTCCA
CAGGATCTTGCTGGCGGCTATACTTCTTCTCTTGCTTGTCACAGAGCGCTACAGGATGCGTTCAGTGGGC
TCTTCTGGCAGCCCAGATAA

Translation (309 aa):
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRVQLFEDPTVDK
EVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLENTKKKMEIYQKENKDVIQKNKLKL
TREQEELEEALEVERQEHEQRRLFIQKEEELQQALKRKNKQAFLDELESSDLPVALLLAQHKDRSTQLEM
QLEKPRSMKPVTFSTGIKMGQQISLAPIQKLEEALYEYQPLQIETCGPQVPEQELLGRLGYLNHVRAASP
QDLAGGYTSSLACHRALQDAFSGLFWQPR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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