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Report for CCDS17864.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17864.1 Public Mus musculus 3 Dapp1 23 108 98 CCDS HistoryNCBI Gene:26377Re-query CCDS DB by CCDS ID:17864.1Re-query CCDS DB by GeneID:26377See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17864.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000029806.12 ENSMUSP00000029806.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000029806.12Link to Ensembl Protein Viewer:ENSMUSP00000029806.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000029806Re-query CCDS DB by Protein ID:ENSMUSP00000029806
Original member Current member NCBI NM_011932.3 NP_036062.1 Accepted alive Link to Nucleotide Sequence:NM_011932.3Link to Protein Sequence:NP_036062.1Re-query CCDS DB by Nucleotide ID:NM_011932Re-query CCDS DB by Protein ID:NP_036062Link to BLAST:NP_036062.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036062.1 280 Q9QXT1 280 100% 0 0

Chromosomal Locations for CCDS 17864.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 137933121 137933189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137935582 137935669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137937737 137937822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137939137 137939199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137940861 137940908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137949647 137949777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137961442 137961575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137965881 137966003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137981319 137981419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (843 nt):
ATGGGCAGAGCAGAACTTCTAGGAGGGAACATGAGTACCCAGGATCCCTCAGAGCTGTGGGGCAGAGCAG
ATGGAGGCACAGACCTGCTCCAGGATTTGGGGTGGTATCACGGCAACCTCACCCGCCATGCTGCCGAAGC
CCTTCTGCTCTCCAATGGACGTGATGGTAGCTACCTGCTGCGGGACAGCAATGAGCAGACTGGGCTCTAC
TCTCTCTCTGTGAGAGCCAAAGACTCTGTCAAACACTTTCATGTTGAATATACTGGGTACTCGTTTAAAT
TCGGCTTTAATGAGTATTCATCTCTAAAGGATTTTGTCAAGCATTTTGCAAATCAGCCTTTGATTGGAAG
CGAGACAGGGACTCTGATGGTTTTGAAGCATCCCTATCCAAGGGAAGTGGAAGAACCTTGCATTTACGAA
TCAGTCCGGGTTCACACAGCGATGCAGACAGGAAGGACAGAGAACGACCTCGTGCCCACTGCGCCTTCTC
TGGGCACCAAAGAAGGCTATCTCACCAAGCAGGGAGGCCTGGTAAAGACCTGGAAAACAAGATGGTTTAC
TTTGCAAAGGAACGAACTGAAATATTTCAAAGACCAGATGTCACCAGAACCAATTCGGATCCTAGACCTA
ACAGAGTGCTCAGCTGTTCAATTTGATTACTCACAGGAACGAGTAAACTGTTTCTGCCTAGTGTTTCCAT
TCAGGACATTTTATCTCTGTGCAAAGACGGGAGTTGAAGCCGATGAATGGATCAAAATACTGAGATGGAA
GTTGTCAAAAATAAGAAAACAGCTGGATCAAGGAGAAGATACCGTCCGATCTAGGTCATTTATCTTCAAA
TAG

Translation (280 aa):
MGRAELLGGNMSTQDPSELWGRADGGTDLLQDLGWYHGNLTRHAAEALLLSNGRDGSYLLRDSNEQTGLY
SLSVRAKDSVKHFHVEYTGYSFKFGFNEYSSLKDFVKHFANQPLIGSETGTLMVLKHPYPREVEEPCIYE
SVRVHTAMQTGRTENDLVPTAPSLGTKEGYLTKQGGLVKTWKTRWFTLQRNELKYFKDQMSPEPIRILDL
TECSAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSKIRKQLDQGEDTVRSRSFIFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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