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Report for CCDS79585.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79585.1 Public Mus musculus 18 Crem 23 108 98 CCDS HistoryNCBI Gene:12916Re-query CCDS DB by CCDS ID:79585.1Re-query CCDS DB by GeneID:12916See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79585.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049942.12 ENSMUSP00000061925.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049942.12Link to Ensembl Protein Viewer:ENSMUSP00000061925.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000049942Re-query CCDS DB by Protein ID:ENSMUSP00000061925
Original member Current member NCBI NM_001311067.1 NP_001297996.1 Accepted alive Link to Nucleotide Sequence:NM_001311067.1Link to Protein Sequence:NP_001297996.1Re-query CCDS DB by Nucleotide ID:NM_001311067Re-query CCDS DB by Protein ID:NP_001297996Link to BLAST:NP_001297996.1

Chromosomal Locations for CCDS 79585.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 3267985 3268129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3273422 3273578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 3276694 3276751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (360 nt):
ATGATGTATCCCCATTTTACAGATGAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTGCCACAGGTG
ACATGCCAACTTACCAGATCCGAGCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCTGCCTCACC
AGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCTGATGAAA
AACAGGGAAGCTGCCCGGGAGTGTCGCAGGAAGAAGAAAGAATATGTCAAATGTCTTGAAAATCGTGTGG
CTGTGCTTGAAAATCAAAACAAGACCCTCATTGAGGAACTCAAGGCCCTCAAAGACCTTTATTGCCATAA
AGCAGAGTAA

Translation (119 aa):
MMYPHFTDEETDLAPSHMAAATGDMPTYQIRAPTTALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMK
NREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKAE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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