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Report for CCDS32163.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32163.1 Public Homo sapiens 14 EXOC3L4 24 110 108 CCDS HistoryNCBI Gene:91828Re-query CCDS DB by CCDS ID:32163.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32163.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380069.7 ENSP00000369409.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380069.7Link to Ensembl Protein Viewer:ENSP00000369409.3Re-query CCDS DB by Nucleotide ID:ENST00000380069Re-query CCDS DB by Protein ID:ENSP00000369409
Original member Current member EBI ENST00000687959.1 ENSP00000508483.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000687959.1Link to Ensembl Protein Viewer:ENSP00000508483.1Re-query CCDS DB by Nucleotide ID:ENST00000687959Re-query CCDS DB by Protein ID:ENSP00000508483
Original member Current member EBI ENST00000688303.1 ENSP00000509130.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000688303.1Link to Ensembl Protein Viewer:ENSP00000509130.1Re-query CCDS DB by Nucleotide ID:ENST00000688303Re-query CCDS DB by Protein ID:ENSP00000509130
Original member Current member NCBI NM_001077594.2 NP_001071062.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001077594.2Link to Protein Sequence:NP_001071062.1Re-query CCDS DB by Nucleotide ID:NM_001077594Re-query CCDS DB by Protein ID:NP_001071062Link to BLAST:NP_001071062.1
Original member Current member NCBI NM_001394941.1 NP_001381870.1 Accepted alive Link to Nucleotide Sequence:NM_001394941.1Link to Protein Sequence:NP_001381870.1Re-query CCDS DB by Nucleotide ID:NM_001394941Re-query CCDS DB by Protein ID:NP_001381870Link to BLAST:NP_001381870.1
Original member Current member NCBI NM_001394942.1 NP_001381871.1 Accepted alive Link to Nucleotide Sequence:NM_001394942.1Link to Protein Sequence:NP_001381871.1Re-query CCDS DB by Nucleotide ID:NM_001394942Re-query CCDS DB by Protein ID:NP_001381871Link to BLAST:NP_001381871.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001071062.1 722 Q17RC7 722 100% 0 0
NP_001381870.1 722 Q17RC7 722 100% 0 0
NP_001381871.1 722 Q17RC7 722 100% 0 0

Chromosomal Locations for CCDS 32163.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 103100220 103100613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103102118 103102772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103103941 103104052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103104267 103104389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103104738 103104838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103104992 103105072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103106785 103106899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103107424 103107543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103107631 103107783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103108396 103108517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103110031 103110223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2169 nt):
ATGCCATCACCACAGACAGACACTCCTGGGCCGGAGCTGCAGAGTCCCAAGGAGGCTGAGGAGCCACAGA
CTCCAGCTCAGGGCTCCCGGCGAACAAGCAGCAGGAAAGAGCCCAATGCCCACCGCAAGGATGGCACAAG
GCTGGGCCTGGGCTCCCTGAGGCAGGCCTTCTCCCGGGCCAGCCAGCGGGCTTTGACCCAGGTCTCCAAG
GAAGATACGGGCCTGTTCCGGCGAAGCTCCTGCTCCCTGTTCCGGTCCTTCCGGCAAGCCCTGAATGACG
GCCCAGCTACCGGCCATTCCCAGGCCACTCCTGAGGTGCCCTCGGGGGTCATGAATGGTGTCAGCCAGCA
GGCATCCACTGGGGCAGCGTCTGAGGAACTGAAACCCGAGGCAGAAGGCAAATCCGTGGCCGACCTCATT
ACTGAACGGCAACTGCTGGCGGCCTTCGAACAGCTTCTGCGCCTGGAGACGCTGCTGGTGGCCGAGAAGG
CCTCGCGCACCTTTGAGCAGGACCCTACGGCCTTCGCGCGGCGCGCTATGGACGTGTGCCTGCTTTACGA
CGGGCTGGCAGCCGAGATCGGCGCCATCGTGCGCGAGACGCTGGACAGCGACGGTGTGGACGCGGCCGCG
CTGGCCGAGCTGGCCCGCGTGGTGAGCGCGGAGGAGGAAGCCCACCCTTCTCCCCCCGACGACGGCGACT
TCCTGCGCACGCCGCGCCGCTGGCGCCAGCACTGGGAGGAGGCGGTGCGGCGAAGCGCTCAGGAGCGCGT
GCGGCGGCCGGGCGCGGGGTGGGCCTTCGGGGAGGCGGAGGGCGCGTCGGGTTTGGCCCAGCTTCTGGCC
GAGCTGGGTGGCTTGGTTCGCCGCGACCTGCAGAAGGTGCGGCAGGAGGTGCAGCCCGCGTATGCGGCGG
CCGGCTTCCCAGCGTGGGAGGTCTATCTGCGTGCCTTCCACAGCGCCGTGGCCCAGCGCCTCCAGGAGCT
CGCGCGCGACGCCCGCGGCTGCGAGCAGCTCTATATCCTGCTGGACTGGGCCGCCAACGTCTACGGCAGT
CCTGACTTCCTGGGCGCCCCGGGGCTGGCGCTGCCCGCCGAGCCGCTGCCTCCGCTCCTGGCGCCGGACG
TGTGGGCCCGACTGGAGAGCGACTACACCAGCTTCCTGGAGGCCAAGATCGCAAGCTGCTTCGACAGCAT
CTTGCAGCTGGAGCAGAGTCACTGGGCGGCCGCCGAGGTCCCCGAGGTGCTGCAGGGCCTCTACCAGGCG
CCGCTGTCCATGGACGTCCATATGCTCGTGGCCGAGCACGTGAAGGCGGCCGGCGCCATCTCCGCGGAGC
TGGAGGCCACCACCCTGCGAATCTGCACGCGGGCGCTCGGCCTCTTCGTGCCCAGGTTTGAAAAGGCTTT
TCTGGCGTCGGAGGCGGTGAGCGAGCCGCACCTGGGCGCCTACATCAACGCCTGCGAGGAGCTCAGGACC
AGTCTTCTCTCCAGGTTCCCAGGAACCCAAGAGGAGCTGGAGAAGCCCCTGGTGACGGCCACCTGCAGCT
TCCAGAAGCACTTGCTTCAGGGCTTGCAGCGTGAGTTGCAGCCGCTCTTCAGGGTTGTGTGCACCAGGGA
CTGGCTGACGCAGGACTGGCTGCATCCCCTCATGGACAAGGTGGTGACCTTCGCCGGTCATCTCCAGCGT
GTGGCCCGGCCGCGGGCACAGGAGACTCTGCAGGAGGTGCACCGGTTCGTGGTCCGCGAGTACCTGGCGC
GGGCGCTGAGGCCACGGGAGCGGTTCCGGGGCATGGAGCGCATGCATGGCTCCCAGAAGATGAGCCTGGA
TGCCCAGGCCATCAGCGACACCTTCCAGGGCCTGGGTTCCGAGGCCACATGGTTGGACCAAGCCATCCAG
TGCGTGGCTGAGATCCTGGGCGAGACCTACAAAGATGACATCCAGCGGCACCTGGAGACTCTTATCCGGA
GCTACCCCGACATCAGGCGGGACCACATACTGGCCATTCTGGCGCTGCGCCGACTGGGCCGCCAGCGGAA
CCAGCATCTCTTGCAGCACACTCAAGACCTGCTGAGAGCTGCGGCCGGGGCGGCGGGTGCGGAGGCCCCT
CGGGGCCGCGTGCTCTTCGAGGAGATCAAGGTGCCCAGTGCCATGGCTGTGCTGATCACCTGCGTCTAG

Translation (722 aa):
MPSPQTDTPGPELQSPKEAEEPQTPAQGSRRTSSRKEPNAHRKDGTRLGLGSLRQAFSRASQRALTQVSK
EDTGLFRRSSCSLFRSFRQALNDGPATGHSQATPEVPSGVMNGVSQQASTGAASEELKPEAEGKSVADLI
TERQLLAAFEQLLRLETLLVAEKASRTFEQDPTAFARRAMDVCLLYDGLAAEIGAIVRETLDSDGVDAAA
LAELARVVSAEEEAHPSPPDDGDFLRTPRRWRQHWEEAVRRSAQERVRRPGAGWAFGEAEGASGLAQLLA
ELGGLVRRDLQKVRQEVQPAYAAAGFPAWEVYLRAFHSAVAQRLQELARDARGCEQLYILLDWAANVYGS
PDFLGAPGLALPAEPLPPLLAPDVWARLESDYTSFLEAKIASCFDSILQLEQSHWAAAEVPEVLQGLYQA
PLSMDVHMLVAEHVKAAGAISAELEATTLRICTRALGLFVPRFEKAFLASEAVSEPHLGAYINACEELRT
SLLSRFPGTQEELEKPLVTATCSFQKHLLQGLQRELQPLFRVVCTRDWLTQDWLHPLMDKVVTFAGHLQR
VARPRAQETLQEVHRFVVREYLARALRPRERFRGMERMHGSQKMSLDAQAISDTFQGLGSEATWLDQAIQ
CVAEILGETYKDDIQRHLETLIRSYPDIRRDHILAILALRRLGRQRNQHLLQHTQDLLRAAAGAAGAEAP
RGRVLFEEIKVPSAMAVLITCV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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