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Report for CCDS12500.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12500.1 Public Homo sapiens 19 ZNF585B 24 110 108 CCDS HistoryNCBI Gene:92285Re-query CCDS DB by CCDS ID:12500.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12500.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000532828.7 ENSP00000433773.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000532828.7Link to Ensembl Protein Viewer:ENSP00000433773.1Re-query CCDS DB by Nucleotide ID:ENST00000532828Re-query CCDS DB by Protein ID:ENSP00000433773
Original member Current member NCBI NM_152279.4 NP_689492.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152279.4Link to Protein Sequence:NP_689492.3Re-query CCDS DB by Nucleotide ID:NM_152279Re-query CCDS DB by Protein ID:NP_689492Link to BLAST:NP_689492.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689492.3 769 Q52M93 769 100% 0 0

Chromosomal Locations for CCDS 12500.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 37185227 37187244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37189661 37189753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37190024 37190150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37207040 37207111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2310 nt):
ATGCCAGCTAGTTGGACCTCACCCCAGAAATCCTCAGCCCTGGCTCCAGAGGATCATGGCAGCTCCTATG
AGGGATCAGTGTCCTTCAGGGATGTGGCTATCGATTTCAGCAGAGAGGAATGGCGGCACCTGGACCTTTC
TCAGAGAAACCTGTACCGGGATGTGATGCTGGAGACCTACAGCCACCTGCTCTCAGTAGGGTATCAAGTT
CCTAAACCAGAGGTGGTCATGTTGGAGCAAGGAAAGGAACCATGGGCACTGCAGGGTGAGAGGCCACGTC
ACAGCTGCCCAGGAGAGAAATTATGGGACCATAATCAACATAGAAAAATCATCGGTTATAAACCAGCTTC
CTCTCAAGATCAAAAAATTTATTCTGGGGAAAAATCCTATGAGTGTGCTGAATTTGGAAAGAGCTTCACC
TGGAAGTCACAGTTCAAGGTACATCTGAAAGTTCCTACAGGAGAAAAACTCTATGTATGTATTGAATGTG
GGAGGGCTTTTGTACAGAAGCCAGAATTCATCACACATCAGAAAACCCATATGAGAGAGAAGCCCTATAA
GTGCAATGAATGTGGAAAATCCTTTTTTCAAGTATCGTCTCTTTTCAGGCATCACAGAATTCATACCGGA
GAAAAACTATATGAATGTAGTGAATGTGGGAAAGGTTTCCCTTATAACTCAGATCTCAGTATACATGAGA
AAATTCATACTGGAGAGAGACACCATGAATGCACTGACTGTGGCAAAGCGTTCACACAAAAGTCCACACT
CAAGATTCATCAGAAAATCCATACAGGCGAGAGATCCTACATCTGTATTGAATGCGGGCAGGCCTTCATC
CAGAAAACACAATTGATTGCACACCGAAGAATTCATAGTGGAGAAAAACCATATGAATGCAATAACTGTG
GCAAATCCTTCATTTCCAAGTCACAACTTCAGGTACATCAACGTGTTCACACAAGAGTGAAGCCCTATAT
ATGTACCGAATATGGGAAGGTCTTCAGCAATAATTCCAACCTCATTACACATGAGAAGATTCAAAGTAGA
GAGAAATCTTCCATATGTACTGAGTGTGGGAAGGCCTTTACCTACAGGTCAGAGTTGATTATTCATCAGA
GAATTCACACTGGAGAGAAACCTTATGAATGCAGTGACTGTGGGAGAGCCTTCACTCAGAAGTCAGCACT
CACAGTGCATCAGAGAATTCATACAGGAGAAAAATCGTATATATGCATGAAATGTGGACTGGCCTTCATC
CGGAAGGCACACTTGATTACACATCAAATAATTCATACTGGAGAGAAACCTTATAAATGTGGTCACTGTG
GGAAATTGTTTACTTCCAAGTCACAACTCCATGTTCATAAACGAATTCACACAGGAGAAAAGCCCTATGT
ATGCAATAAATGTGGGAAGGCATTCACCAACCGGTCAAATCTCATTACACATCAGAAAACTCATACAGGA
GAGAAATCTTATATATGTTCCAAATGTGGAAAGGCCTTCACCCAGAGGTCAGACTTGATTACACATCAGA
GAATCCATACTGGGGAGAAGCCTTATGAATGCAATACTTGTGGAAAAGCCTTTACTCAGAAGTCAAATCT
TAATATACATCAGAAAATTCACACTGGAGAGAGACAGTATGAATGCCACGAATGTGGGAAAGCCTTCAAC
CAGAAATCAATACTCATTGTTCATCAGAAAATTCATACAGGAGAGAAACCCTATGTATGCACTGAGTGTG
GAAGAGCTTTCATCCGCAAGTCAAACTTTATTACTCATCAAAGAATTCATACTGGAGAGAAGCCTTATGA
ATGCAGTGACTGTGGGAAGTCCTTTACCTCCAAGTCTCAGCTCCTGGTGCATCAGCCAGTTCACACAGGA
GAGAAACCCTATGTGTGTGCCGAGTGTGGGAAAGCCTTTAGTGGCAGGTCAAATCTCAGTAAGCACCAGA
AAACTCATACCGGAGAAAAGCCCTACATTTGTTCTGAATGTGGGAAGACCTTTCGACAGAAGTCAGAGTT
GATTACACATCACAGAATTCATACTGGAGAGAAACCTTATGAGTGCAGTGACTGTGGGAAGTCTTTCACT
AAAAAATCACAGCTCCAAGTGCATCAGCGAATTCACACTGGAGAGAAGCCTTACGTGTGTGCTGAGTGTG
GGAAGGCCTTTAGCAACAGGTCCAATTTGAATAAACATCAGACAACACACACTGGAGACAAACCCTACAA
GTGTGGCATCTGTGGGAAAGGCTTCGTTCAGAAATCAGTGTTCAGTGTTCATCAGAGCAGCCACGCTTGA

Translation (769 aa):
MPASWTSPQKSSALAPEDHGSSYEGSVSFRDVAIDFSREEWRHLDLSQRNLYRDVMLETYSHLLSVGYQV
PKPEVVMLEQGKEPWALQGERPRHSCPGEKLWDHNQHRKIIGYKPASSQDQKIYSGEKSYECAEFGKSFT
WKSQFKVHLKVPTGEKLYVCIECGRAFVQKPEFITHQKTHMREKPYKCNECGKSFFQVSSLFRHHRIHTG
EKLYECSECGKGFPYNSDLSIHEKIHTGERHHECTDCGKAFTQKSTLKIHQKIHTGERSYICIECGQAFI
QKTQLIAHRRIHSGEKPYECNNCGKSFISKSQLQVHQRVHTRVKPYICTEYGKVFSNNSNLITHEKIQSR
EKSSICTECGKAFTYRSELIIHQRIHTGEKPYECSDCGRAFTQKSALTVHQRIHTGEKSYICMKCGLAFI
RKAHLITHQIIHTGEKPYKCGHCGKLFTSKSQLHVHKRIHTGEKPYVCNKCGKAFTNRSNLITHQKTHTG
EKSYICSKCGKAFTQRSDLITHQRIHTGEKPYECNTCGKAFTQKSNLNIHQKIHTGERQYECHECGKAFN
QKSILIVHQKIHTGEKPYVCTECGRAFIRKSNFITHQRIHTGEKPYECSDCGKSFTSKSQLLVHQPVHTG
EKPYVCAECGKAFSGRSNLSKHQKTHTGEKPYICSECGKTFRQKSELITHHRIHTGEKPYECSDCGKSFT
KKSQLQVHQRIHTGEKPYVCAECGKAFSNRSNLNKHQTTHTGDKPYKCGICGKGFVQKSVFSVHQSSHA


Links Key
 Links to:   History report
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  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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