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Report for CCDS22748.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22748.1 Public Mus musculus 8 Cpne7 23 108 98 CCDS HistoryNCBI Gene:102278Re-query CCDS DB by CCDS ID:22748.1Re-query CCDS DB by GeneID:102278See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22748.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037900.8 ENSMUSP00000042159.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037900.8Link to Ensembl Protein Viewer:ENSMUSP00000042159.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000037900Re-query CCDS DB by Protein ID:ENSMUSP00000042159
Original member Current member NCBI NM_170684.2 NP_733785.1 Accepted alive Link to Nucleotide Sequence:NM_170684.2Link to Protein Sequence:NP_733785.1Re-query CCDS DB by Nucleotide ID:NM_170684Re-query CCDS DB by Protein ID:NP_733785Link to BLAST:NP_733785.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_733785.1 557 Q0VE82 557 100% 0 0

Chromosomal Locations for CCDS 22748.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 123117497 123117664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123119619 123119801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123124148 123124222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123124402 123124476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123125562 123125645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123126241 123126330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123126633 123126734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123127353 123127439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123127733 123127792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123128578 123128711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123129543 123129597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123130054 123130105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123130173 123130306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123133609 123133845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123134440 123134577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1674 nt):
ATGAGCGGCGACTCGGAGCGCGCGGTGGCCCCGGGGGTGGTGCCTGCACCCTGCGCCTCGAAGGTGGAGC
TGCGGCTGAGCTGCCGGCACCTGCTGGACCGGGACCCATTGACCAAGTCCGACCCCAGCGTGGTGCTGCT
GCAGCAGGCACAGGGCCAGTGGCTACAGGTGGACAGAACAGAGGTGGTGAAGAGCAGCCTGCATCCTGTG
TTCTCCAAGGTCTTCACTGTCGACTACTACTTCGAGGGGGTGCAGAAGCTACGGTTTGAGGTGTATGACA
CCCACGGGCCTAGTGGGCTGACTTGCCAGGATGATGACTTCCTAGGGGGCATGGAGTGTACCCTGGGTCA
AATTGTGGCCCAGAAGAAGATGACACGGCCATTGCTGTTGCGATTCGGCAGGAATGCTGGCAAGTCCACC
ATCACGGTGATAGCAGAGGACATCTCTGGGAACAACGGCTATGTGGAGCTCTCCTTCCAGGCCCGGAAAC
TGGATGACAAGGACCTCTTCAGCAAGTCGGACCCCTTCCTAGAGCTGTATCGGGTTAATGACGACGGGAG
TGAGCAGCTCGTGTACAGGACAGAGGTAGTGAAGAACAATCTTAACCCAGTGTGGGAACCCTTCAAGGTG
TCCCTGAATTCACTCTGCAGCTGCGAGGAGACACGGCCTCTGAAGTGCCTGGTCTGGGACTATGACTCCC
GAGGAAAGCATGACTTCATTGGCGACTTCACCACCACGTTCGCAGAGATGCAGAAGGCCTTTGAGGAGGA
GCAGCAGGCCCAGTGGGACTGTGTGAATGCCAAGTACAAACAGAAGAAGCGCAATTACAAGAATTCCGGG
GTGGTGATCCTGGCAGACCTGAAGCTCCACAGGGTCCACTCCTTCCTGGATTACATCATGGGTGGCTGCC
AGATCCACTGTACGGTAGCCATCGACTTCACAGCCTCCAACGGTGACCCGAGGAACAGCTGCTCCCTCCA
CCACATCAACCCTTACCAGCCCAACGAGTACCTGAGGGCATTGGTGGCAGTGGGCGAGGTCTGCCAGGAT
TATGACAGTGACAAGCGGTTTTCTGCTCTGGGATTTGGAGCCCGGATCCCTCCCAAGTATGAGGTGTCCC
ACGACTTTGCCATCAATTTCAACCCTGAGGACGATGAGTGTGAAGGAATCCAGGGCGTGGTGGAGGCCTA
CCAGAACTGCCTGCCGAAGGTTCAGCTCTACGGCCCCACCAACGTGGCACCCATCATCTCTAAGGTGGCC
CGCATGGCAGCGGCTGAGGAGAGCACAGGAGAGGCTTCTCAATATTACATACTGCTGATCCTCACGGACG
GTGTGGTGACGGATATGTCGGACACTCGAGAGGCCATTGTGCGTGCCTCCCACCTGCCCATGTCTGTCAT
CATTGTTGGGGTGGGCAACGCTGACTTCACAGATATGCAAATCTTAGACGGGGATGATGGAGTCCTGCGT
TCCCCACGGGGCGAGCCTGCACTCCGGGACATCGTTCAGTTTGTGCCCTTCCGTGAGCTAAAGAACGCAT
CCCCCGCAGCACTGGCCAAGTGTGTGTTGGCCGAGGTGCCAAAGCAGGTGGTTGAATACTACAGCCACAA
GGAGCTGCCTCCTCGAAGCCTTGGCGCCCAGACTGGAGAGGCTGCTGCCAGCTCAGCGCCATGA

Translation (557 aa):
MSGDSERAVAPGVVPAPCASKVELRLSCRHLLDRDPLTKSDPSVVLLQQAQGQWLQVDRTEVVKSSLHPV
FSKVFTVDYYFEGVQKLRFEVYDTHGPSGLTCQDDDFLGGMECTLGQIVAQKKMTRPLLLRFGRNAGKST
ITVIAEDISGNNGYVELSFQARKLDDKDLFSKSDPFLELYRVNDDGSEQLVYRTEVVKNNLNPVWEPFKV
SLNSLCSCEETRPLKCLVWDYDSRGKHDFIGDFTTTFAEMQKAFEEEQQAQWDCVNAKYKQKKRNYKNSG
VVILADLKLHRVHSFLDYIMGGCQIHCTVAIDFTASNGDPRNSCSLHHINPYQPNEYLRALVAVGEVCQD
YDSDKRFSALGFGARIPPKYEVSHDFAINFNPEDDECEGIQGVVEAYQNCLPKVQLYGPTNVAPIISKVA
RMAAAEESTGEASQYYILLILTDGVVTDMSDTREAIVRASHLPMSVIIVGVGNADFTDMQILDGDDGVLR
SPRGEPALRDIVQFVPFRELKNASPAALAKCVLAEVPKQVVEYYSHKELPPRSLGAQTGEAAASSAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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