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Report for CCDS81951.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81951.1 Public Homo sapiens 16 ARL6IP1 24 110 108 CCDS HistoryNCBI Gene:23204Re-query CCDS DB by CCDS ID:81951.1Re-query CCDS DB by GeneID:23204See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81951.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000546206.6 ENSP00000440048.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000546206.6Link to Ensembl Protein Viewer:ENSP00000440048.2Re-query CCDS DB by Nucleotide ID:ENST00000546206Re-query CCDS DB by Protein ID:ENSP00000440048
Original member Current member NCBI NM_001313858.1 NP_001300787.1 Accepted alive Link to Nucleotide Sequence:NM_001313858.1Link to Protein Sequence:NP_001300787.1Re-query CCDS DB by Nucleotide ID:NM_001313858Re-query CCDS DB by Protein ID:NP_001300787Link to BLAST:NP_001300787.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001300787.1 174 Q15041-2 174 100% 0 0

Chromosomal Locations for CCDS 81951.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 18793252 18793370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 18794599 18794683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 18795464 18795581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 18797925 18798044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 18798701 18798783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (525 nt):
ATGCTGATGGCTGATAAAGTCCTCCGATGGGAAAGAGCCTGGTTTCCACCTGCCATCATGGGTGTGGTTT
CTTTGGTGTTTCTGATTATCTACTATCTAGATCCATCTGTTCTGTCCGGCGTTTCCTGTTTTGTTATGTT
TTTGTGCTTGGCTGACTACCTTGTTCCCATTCTAGCGCCTAGAATTTTTGGCTCCAATAAATGGACCACT
GAACAACAGCAAAGATTCCATGAAATTTGCAGCAATCTAGTAAAAACTCGACGCAGAGCTGTGGGTTGGT
GGAAACGCCTCTTCACACTAAAGGAAGAAAAACCTAAGATGTACTTCATGACCATGATCGTTTCCCTTGC
TGCGGTTGCTTGGGTGGGACAACAAGTCCACAACCTGCTTCTCACCTACCTGATAGTGACTTCCTTACTA
TTGCTTCCTGGACTAAACCAACATGGAATCATTTTGAAGTACATTGGAATGGCCAAGAGGGAGATAAACA
AACTTCTCAAACAAAAAGAAAAGAAAAACGAATGA

Translation (174 aa):
MLMADKVLRWERAWFPPAIMGVVSLVFLIIYYLDPSVLSGVSCFVMFLCLADYLVPILAPRIFGSNKWTT
EQQQRFHEICSNLVKTRRRAVGWWKRLFTLKEEKPKMYFMTMIVSLAAVAWVGQQVHNLLLTYLIVTSLL
LLPGLNQHGIILKYIGMAKREINKLLKQKEKKNE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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