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Report for CCDS21812.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21812.1 Public Mus musculus 7 Plk1 23 108 98 CCDS HistoryNCBI Gene:18817Re-query CCDS DB by CCDS ID:21812.1Re-query CCDS DB by GeneID:18817See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21812.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033154.7 ENSMUSP00000033154.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033154.7Link to Ensembl Protein Viewer:ENSMUSP00000033154.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000033154Re-query CCDS DB by Protein ID:ENSMUSP00000033154
Original member Current member NCBI NM_011121.4 NP_035251.3 Accepted alive Link to Nucleotide Sequence:NM_011121.4Link to Protein Sequence:NP_035251.3Re-query CCDS DB by Nucleotide ID:NM_011121Re-query CCDS DB by Protein ID:NP_035251Link to BLAST:NP_035251.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035251.3 603 Q07832 603 100% 0 0

Chromosomal Locations for CCDS 21812.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 122159543 122159950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122160536 122160704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122161507 122161651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122162393 122162486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122164020 122164239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122167597 122167752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122168566 122168643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122168829 122168983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122169081 122169263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122169387 122169590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1812 nt):
ATGAATGCAGCGGCCAAAGCTGGAAAGCTGGCTCGAGCACCAGCCGACCTCGGGAAAGGTGGGGTTCCGG
GAGATGCAGTTCCCGGTGCCCCAGTGGCCGCCCCGCTGGCGAAAGAAATTCCGGAGGTCCTAGTGGACCC
ACGCAGCCGGCGGCAGTATGTACGGGGGCGCTTTCTGGGTAAAGGAGGCTTCGCCAAATGCTTCGAGATC
TCAGACGCAGACACAAAAGAGGTGTTCGCAGGCAAGATCGTGCCTAAGTCTTTGCTGCTCAAGCCCCACC
AGAAGGAGAAGATGTCTATGGAGATCTCAATTCACCGCAGCCTAGCACACCAACACGTCGTAGGCTTCCA
TGACTTTTTTGAGGACAGCGACTTTGTATTTGTAGTTTTGGAGCTCTGTCGCAGGAGGTCCCTCCTGGAG
CTGCACAAGAGGAGGAAGGCACTGACCGAGCCTGAGGCCCGCTACTACCTGCGACAGATAGTCCTGGGCT
GCCAGTACCTGCACCGCAATCAGGTCATTCACAGGGACCTCAAGCTGGGCAACCTCTTCCTGAACGAGGA
TCTGGAGGTGAAAATAGGGGATTTTGGCTTGGCAACCAAAGTGGAATATGAAGGGGAACGAAAGAAGACC
TTGTGTGGCACTCCTAACTACATAGCTCCTGAGGTGCTGAGCAAGAAGGGACACAGTTTTGAGGTGGATG
TGTGGTCCATTGGGTGCATCATGTATACCTTGCTAGTGGGCAAGCCTCCCTTTGAGACCTCGTGCCTAAA
AGAGACCTACCTCCGGATCAAGAAAAATGAATACAGTATTCCCAAGCACATCAACCCAGTGGCCGCCTCC
CTCATCCAGAAGATGCTTCAGACAGACCCCACTGCCCGCCCCACCATTCACGAGTTGCTCAATGACGAGT
TCTTCACTTCTGGCTACATCCCCGCCCGTCTCCCTATTACCTGCCTCACCATCCCACCAAGGTTTTCAAT
CGCTCCCAGCAGCCTGGACCCCAGCAGCAGGAAACCTCTCAAAGTCCTCAATAAAGGTGTGGAGAACCCC
CTGCCTGACCGTCCCCGGGAGAAAGAGGAACCGGTGGTCCGGGAGACAAATGAGGCCATTGAGTGCCACC
TTAGTGACTTGCTACAGCAGCTGACCAGTGTCAACGCCTCCAAGCCCTCGGAGCGCGGGCTGGTGCGGCA
AGAGGAGGCTGAGGATCCTGCCTGCATCCCCATCTTCTGGGTCAGCAAGTGGGTGGACTATTCGGACAAG
TATGGCCTTGGGTATCAGCTGTGTGACAACAGTGTGGGGGTGCTTTTTAATGACTCAACACGCCTGATTC
TCTACAATGACGGGGACAGCCTGCAGTACATAGAGCGTGATGGCACGGAGTCCTATCTCACTGTGAGCTC
CCATCCCAATTCCTTGATGAAGAAGATCACTCTCCTCAACTATTTCCGCAATTACATGAGTGAGCACCTG
CTGAAGGCAGGGGCCAACATCACACCCCGGGAAGGCGACGAGCTGGCCCGGCTGCCCTACCTACGAACGT
GGTTCCGCACACGCAGCGCCATCATCCTGCACCTCAGCAACGGCACCGTGCAGATTAACTTCTTCCAGGA
CCACACCAAACTTATCCTGTGCCCCCTGATGGCAGCGGTGACCTACATCAACGAGAAGAGGGACTTCCAA
ACGTACCGCCTGAGCCTCCTGGAGGAGTATGGCTGCTGCAAGGAGCTGGCCAGCCGCCTCCGCTACGCCC
GCACCATGGTAGACAAGCTGCTGAGCTCGCGCTCCGCCAGCAACCGCCTCAAGGCCTCCTAG

Translation (603 aa):
MNAAAKAGKLARAPADLGKGGVPGDAVPGAPVAAPLAKEIPEVLVDPRSRRQYVRGRFLGKGGFAKCFEI
SDADTKEVFAGKIVPKSLLLKPHQKEKMSMEISIHRSLAHQHVVGFHDFFEDSDFVFVVLELCRRRSLLE
LHKRRKALTEPEARYYLRQIVLGCQYLHRNQVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYEGERKKT
LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS
LIQKMLQTDPTARPTIHELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSSRKPLKVLNKGVENP
LPDRPREKEEPVVRETNEAIECHLSDLLQQLTSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDK
YGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQYIERDGTESYLTVSSHPNSLMKKITLLNYFRNYMSEHL
LKAGANITPREGDELARLPYLRTWFRTRSAIILHLSNGTVQINFFQDHTKLILCPLMAAVTYINEKRDFQ
TYRLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNRLKAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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