NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS7049.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7049.1 Public Homo sapiens 9 ARRDC1 24 110 108 CCDS HistoryNCBI Gene:92714Re-query CCDS DB by CCDS ID:7049.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7049.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371421.9 ENSP00000360475.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371421.9Link to Ensembl Protein Viewer:ENSP00000360475.4Re-query CCDS DB by Nucleotide ID:ENST00000371421Re-query CCDS DB by Protein ID:ENSP00000360475
Original member Current member NCBI NM_152285.4 NP_689498.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152285.4Link to Protein Sequence:NP_689498.1Re-query CCDS DB by Nucleotide ID:NM_152285Re-query CCDS DB by Protein ID:NP_689498Link to BLAST:NP_689498.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689498.1 433 Q8N5I2 433 100% 0 0

Chromosomal Locations for CCDS 7049.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 137605718 137605835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137612896 137613006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137613460 137613510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137613615 137613769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137614032 137614214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137614299 137614475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137614559 137615000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137615074 137615138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1302 nt):
ATGGGGCGAGTGCAGCTCTTCGAGATCAGCCTGAGCCACGGCCGCGTCGTCTACAGCCCCGGGGAGCCGT
TGGCTGGGACCGTGCGCGTGCGCCTGGGGGCACCGCTGCCGTTCCGAGCCATCCGGGTGACCTGCATAGG
TTCCTGCGGGGTCTCCAACAAGGCTAATGACACAGCGTGGGTAGTGGAGGAGGGTTACTTCAACAGTTCC
CTGTCGCTGGCAGACAAGGGGAGCCTGCCCGCTGGAGAGCACAGCTTCCCCTTCCAGTTCCTGCTTCCTG
CCACTGCACCCACGTCCTTTGAGGGTCCTTTCGGGAAGATCGTGCACCAGGTGAGGGCCGCCATCCACAC
GCCACGGTTTTCCAAGGATCACAAGTGCAGCCTCGTGTTCTATATCTTGAGCCCCTTGAACCTGAACAGC
ATCCCAGACATTGAGCAACCCAACGTGGCCTCTGCCACCAAGAAGTTCTCCTACAAGCTGGTGAAGACGG
GCAGCGTGGTCCTCACAGCCAGCACTGATCTCCGCGGCTATGTGGTGGGGCAGGCACTGCAGCTGCATGC
CGACGTTGAGAACCAGTCAGGCAAGGACACCAGCCCTGTGGTGGCCAGTCTGCTGCAGAAAGTGTCCTAT
AAGGCCAAGCGCTGGATCCACGACGTACGGACCATTGCGGAGGTGGAGGGTGCGGGCGTCAAGGCCTGGC
GGCGGGCGCAGTGGCACGAGCAGATCCTGGTGCCTGCCTTGCCCCAGTCGGCCCTGCCGGGCTGCAGCCT
CATCCACATCGACTACTACTTACAGGTCTCTCTGAAGGCGCCGGAAGCTACTGTGACCCTCCCGGTCTTC
ATTGGCAATATTGCTGTGAACCATGCCCCAGTGAGCCCCCGGCCAGGCCTGGGGCTGCCTCCTGGGGCCC
CACCCCTGGTGGTGCCTTCCGCACCACCCCAGGAGGAGGCTGAGGCTGAGGCTGCGGCTGGCGGCCCCCA
CTTCTTGGACCCCGTCTTCCTCTCCACCAAGAGCCATTCGCAGCGGCAGCCCCTGCTGGCCACCTTGAGT
TCTGTGCCTGGTGCGCCGGAGCCCTGCCCTCAGGATGGCAGCCCTGCCTCACACCCGCTGCACCCTCCCT
TGTGCATTTCAACAGGTGCCACTGTCCCCTACTTTGCAGAGGGCTCCGGGGGGCCAGTGCCCACTACCAG
CACCTTGATTCTTCCTCCAGAGTACAGTTCTTGGGGCTACCCCTATGAGGCCCCACCGTCTTATGAGCAG
AGCTGCGGCGGCGTGGAACCCAGCCTGACCCCTGAGAGCTGA

Translation (433 aa):
MGRVQLFEISLSHGRVVYSPGEPLAGTVRVRLGAPLPFRAIRVTCIGSCGVSNKANDTAWVVEEGYFNSS
LSLADKGSLPAGEHSFPFQFLLPATAPTSFEGPFGKIVHQVRAAIHTPRFSKDHKCSLVFYILSPLNLNS
IPDIEQPNVASATKKFSYKLVKTGSVVLTASTDLRGYVVGQALQLHADVENQSGKDTSPVVASLLQKVSY
KAKRWIHDVRTIAEVEGAGVKAWRRAQWHEQILVPALPQSALPGCSLIHIDYYLQVSLKAPEATVTLPVF
IGNIAVNHAPVSPRPGLGLPPGAPPLVVPSAPPQEEAEAEAAAGGPHFLDPVFLSTKSHSQRQPLLATLS
SVPGAPEPCPQDGSPASHPLHPPLCISTGATVPYFAEGSGGPVPTTSTLILPPEYSSWGYPYEAPPSYEQ
SCGGVEPSLTPES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH