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Report for CCDS36457.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36457.1 Public Mus musculus 12 Gemin2 23 108 98 CCDS HistoryNCBI Gene:66603Re-query CCDS DB by CCDS ID:36457.1Re-query CCDS DB by GeneID:66603See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36457.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021379.7 ENSMUSP00000021379.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021379.7Link to Ensembl Protein Viewer:ENSMUSP00000021379.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000021379Re-query CCDS DB by Protein ID:ENSMUSP00000021379
Original member Current member NCBI NM_025656.5 NP_079932.2 Accepted alive Link to Nucleotide Sequence:NM_025656.5Link to Protein Sequence:NP_079932.2Re-query CCDS DB by Nucleotide ID:NM_025656Re-query CCDS DB by Protein ID:NP_079932Link to BLAST:NP_079932.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079932.2 269 Q9CQQ4 269 100% 0 0

Chromosomal Locations for CCDS 36457.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 59013477 59013613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 59013970 59014054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 59016866 59016955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 59017168 59017227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 59018012 59018125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 59020389 59020433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 59021668 59021736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 59025003 59025113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 59026855 59026913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 59027737 59027776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (810 nt):
ATGGCGTGGGTTCCAGCCGAGTCTGCGGTGGAAGAGTTGATGCCACGGTTGTTACCTGTGGAGCCCTGTG
ACTTGACGGAAGGTTTCGATCCCTCGGTCCCCCCCAGGACGCCTCAGGAATATCTGAGGAGAGTGCAGAT
CGAAGCAGCCCAATGTCCAGATGTTGTGGTAGCCCAGATTGACCCAAAGAAGTTGAAAAGGAAGCAAAGT
GTGAACATTTCTCTTTCCGGATGCCAGCCTGCGCCTGAAGGTTACTCTCCAACACTTCAGTGGCAACAAC
AACAAGTGGCACATTTTTCAACTGTTCGACAGAGTGTACACAAGCATAGAAATCACTGGAAATCACAACA
GTTGGACAGTAATGTGGCAATGCCAAAATCTGAAGATGAAGAAGGCTGGAAAAAATTTTGTCTGGGTGAA
AGGTTATGTGCTGAAGGGGCCACTGGACCGTCTACAGAGGAAAGCCCTGGGATCGATTATGTACAAGTTG
GTTTTCCTCCTTTGCTTAGTATTGTAAGCAGAATGAATCAGACAACCATTACTAGTGTCTTGGAATATCT
AAGTAATTGGTTTGGAGAAAGAGACTTTACTCCAGAATTGGGAAGATGGTTTTATGCTTTGTTGGCTTGT
CTTGAAAAGCCTTTATTACCTGAGGCTCATTCACTAATCCGACAGCTTGCAAGAAGATGTTCTGAAGTGA
GGCTGCTGGTGGGCAGTAAAGATGACGAAAGAGTCCCAGCTTTGAATCTGCTGATCTGCTTAGTTAGCAG
GTATTTTGATCAACGCGATTTAGCTGATGAGCCATCTTGA

Translation (269 aa):
MAWVPAESAVEELMPRLLPVEPCDLTEGFDPSVPPRTPQEYLRRVQIEAAQCPDVVVAQIDPKKLKRKQS
VNISLSGCQPAPEGYSPTLQWQQQQVAHFSTVRQSVHKHRNHWKSQQLDSNVAMPKSEDEEGWKKFCLGE
RLCAEGATGPSTEESPGIDYVQVGFPPLLSIVSRMNQTTITSVLEYLSNWFGERDFTPELGRWFYALLAC
LEKPLLPEAHSLIRQLARRCSEVRLLVGSKDDERVPALNLLICLVSRYFDQRDLADEPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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