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Report for CCDS23315.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23315.1 Public Mus musculus 9 Ice2 23 108 98 CCDS HistoryNCBI Gene:93697Re-query CCDS DB by CCDS ID:23315.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23315.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034761.14 ENSMUSP00000034761.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034761.14Link to Ensembl Protein Viewer:ENSMUSP00000034761.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000034761Re-query CCDS DB by Protein ID:ENSMUSP00000034761
Original member Current member NCBI NM_145618.3 NP_663593.2 Accepted alive Link to Nucleotide Sequence:NM_145618.3Link to Protein Sequence:NP_663593.2Re-query CCDS DB by Nucleotide ID:NM_145618Re-query CCDS DB by Protein ID:NP_663593Link to BLAST:NP_663593.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663593.2 988 Q3UZ18-1 988 100% 0 0

Chromosomal Locations for CCDS 23315.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 69399047 69399087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69400477 69400581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69407117 69407366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69408260 69408379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69410112 69410249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69410773 69410889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69411307 69411466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69412202 69412383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69415338 69416361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69416934 69417109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69421661 69421790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69425657 69425741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69426851 69426901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69428316 69428574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 69432041 69432169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2967 nt):
ATGAGCTCTAGCATAACCATGAGTGAACCAAGGCTGAACTGGGATGTTACACCCAAAAATGGCCTTAAAG
CATTTTTCTCTCCAGAAAATTATAAAGACCATTCCATGGCTCCAAGTTTAAAAGAACTCTATATTTTGTC
TAACAGACGTATAGGAGAAAATTTGAGTGTCTCAGCAAGTTCTGTAGAAAATGAGCCTGCAGTTAGTTCA
GCAACTCAAGCAAAGGAAAAAGTTGGGATGATTCTCCTTCCAAAACCACGAGTTCCTTATCCTCGTTTCT
CTCGGTTCTCACAGAGGGAGCAGAGAACTTATGTGGATTTGTTGGCTAAATATGCAAAGCTCCCCTCAAG
TTCCAAGACTGTCGGAACAAATACCAATGAATATCTGCAGTATCTGGATATGAAAAAACATGTGAATGAA
GAAGTTAATGAATTTCTAAAGTTTTTACAAAATTCTGCAAAGAAATGTGCACAGGATTATAATATGCTCT
CTGATGAGGCCCGACTCTTCACGGAGCAACTCCTAAGAGCTTGCATTGAACAAGTGAAAAAGTACCCAGA
ATTTTATACTCTTCATGAAGTTACCAGCCTAATGGGATTCTTCCCCTTCAAAACAGAGATGGGACTGAAG
TTGGAAAAGACTCTTCTTGTTTTGGGCAGTGCAAAGTTTGTAAAAACAGCATTTCCCTCAATGCCTGTGA
AATTACAGCTCTCAAAAGAGGACATGTCTTCCATTGAGACCCCACAACAAAAAGCTGAAGTTATGCACTG
TGATATTAGTAAAGACCCGAACGCAGAGAAGCTTGTTTCAAGATACCACCCGCAGATAGCTCTGACTAGC
CAAGCATTATTCACCTTGCTCAATAACCATGGACCAAGCTACAAGGAGCAGTGGGAAATTCCAGTGTGTG
TTGAGATGATAGCTGTGGAAGGTTCCAAACCAGTTAAAGTAATTTATATCAATTCTCCACTTCCTCGAAA
GCAAATGACAATGAGAGAAAGAAATCAAATCTTCCATGAAGTTCCATTAAAACATATAATATCAAAAAAC
ACATCTGTTCCAGTCTCTGCTGTCTTTATGGACAAACCTGAAGAGTACACCTCTGAGGTGGACATGCCCA
CTGAAGCTGGTGAGTGCCGAAAAATTGAAACTCTGGAAAATTTGGATATGGACTTCGATGGTGATGTCAC
AGAACTTGAAACCTTTGGAGTAACTACTACTAGTCCACCTAGGTCACCAAGTTCAGAAAGTGACTCCTCT
GCACCCCTCATGACAGATGTCCACGCAGTCCCCAAAATAGCAGCTGTGCCTCTGGCACCAGCTACGCCTG
TGGCACCCACTATGCCTGTGGCACCAGCTACACCTGTCACACCCACTATGCCCATGGCACCAGCTACACC
TGAGGCATCAGCTACACCTAACATTACTGATGATTCTAGAAGTTTATGTCAGATTCTGATGAAACAATTA
CAGAAGGAGAAACAGCTATTCTCTGGTGTGGAAGGTGGTCCTGAAGGGTGCAAAAATAAAGATGATCAAG
GACTTGAACCATGTGGTGAAGAGGTCCCCAGTGCCAATGCAAAATCTCTAACACAAGATAATGAAGTCCA
CAGAACTGAGGGAATTTCTAAGGAAAGTGATGTAGGTGTGCTGTGTACCAATGATGAAAGACAGGGTGGT
CAGGGGAATGCAAACAATCCCAACAACACAGCTACTGCATCAGAAGCAGCTGAAAGTGAGAAAGGGATTC
CTTGTGGCAGTGATACAGATGAGGACTGCTTAATCATTGATACAGAGAGTAGAAGTTGTGATGGGAAGAC
AGCTGATTTAGGTTCTAGGCCAAATTCTTCAGCACAGGCTTCTGCAGGGAATCAGGCCACTACCACTGTT
TCTGAGGAATCTTGTGTTTTAAAGAAACCTATCAAAAGAGTCTACAAAAAATTTGATCCAGTTGGAGAAA
TTCTAAAAATGCAGGATGAGCTTTTAAAACCAGTTTCCAGGAAAGTACCTGAGTTGCCCTTGACTAATTC
AGAAGAATCTAAACAGCCGCCTGCTTCTGAGCAACCCTCTGCTGCTTTGGATGCCGCTCCCTGGCCAAAA
TCCAGTTGGCCCTCTGCATTTCAGAAGCCTAAAGGACGATTGCCATATGAACTTCAAGACTATGTGGAAG
ATACATCAGAATATATAGCTCCTCAAGAAGGAAACTTTGTCTACAAGTTGTTCAGCCTACAAGACCTGTT
GTTACTTGTGCGGTGCAGCATCCAGAGGGTAGAAACGAGACCACGCTCCAAAAAACGGAAGAAGATCAGA
AGACAATTTCCAGTTTACGTGCTACCAAAAGTAGAGTATCAAGGTTGTTATGGAGTTGAAGCTCTGACTG
AAAGCGAGCTCTGTCGCTTCTGGACTGAAAGTTTATTGCATTCCAACTGCTCGTTTTATGTTGGGCATAT
TGATGCATTTACTTCAAAGCTTTTCATGCTAGAAGAAATCGCTTCAGAAGAATTAAAAGAAAAACTTGCA
GCACTCAAGATTTCAAGCTTATTTAACATTCTCCAGCACATTCTAAAGAAATTATGTAGCTTGCAGGAAG
GGTCCTACTTGCTGTCTCATGCAGCAGAAGATTCTTCACTCCTGATCTACAAGACCTCAGATGGAAAAGT
TACTAGAACGGCATATAATTTGCATAAGGCACATTGTGACCTTCCTGGCGTACCCTCCAGTCTCTCGGTT
CCTTGGGTCCCATTAGATCCCAGTTACCTGTTACCATATCATATCCATCATGGACGAGTACCTTGCACTT
TTCCACCTAAACCACTGCGCCCTGCAGCACAAGCAAAGGTTGGTGGGACAAGAATGCCTACCCGTAACCA
CAGGAATCCTGTCTCCATGGAAACCAAAAGCAGTTGCCTGCCTGTTCAGCAAGTTGAAAATGAAGGAGTG
GCTCGGAATAAAAGGAAAATAATGTAA

Translation (988 aa):
MSSSITMSEPRLNWDVTPKNGLKAFFSPENYKDHSMAPSLKELYILSNRRIGENLSVSASSVENEPAVSS
ATQAKEKVGMILLPKPRVPYPRFSRFSQREQRTYVDLLAKYAKLPSSSKTVGTNTNEYLQYLDMKKHVNE
EVNEFLKFLQNSAKKCAQDYNMLSDEARLFTEQLLRACIEQVKKYPEFYTLHEVTSLMGFFPFKTEMGLK
LEKTLLVLGSAKFVKTAFPSMPVKLQLSKEDMSSIETPQQKAEVMHCDISKDPNAEKLVSRYHPQIALTS
QALFTLLNNHGPSYKEQWEIPVCVEMIAVEGSKPVKVIYINSPLPRKQMTMRERNQIFHEVPLKHIISKN
TSVPVSAVFMDKPEEYTSEVDMPTEAGECRKIETLENLDMDFDGDVTELETFGVTTTSPPRSPSSESDSS
APLMTDVHAVPKIAAVPLAPATPVAPTMPVAPATPVTPTMPMAPATPEASATPNITDDSRSLCQILMKQL
QKEKQLFSGVEGGPEGCKNKDDQGLEPCGEEVPSANAKSLTQDNEVHRTEGISKESDVGVLCTNDERQGG
QGNANNPNNTATASEAAESEKGIPCGSDTDEDCLIIDTESRSCDGKTADLGSRPNSSAQASAGNQATTTV
SEESCVLKKPIKRVYKKFDPVGEILKMQDELLKPVSRKVPELPLTNSEESKQPPASEQPSAALDAAPWPK
SSWPSAFQKPKGRLPYELQDYVEDTSEYIAPQEGNFVYKLFSLQDLLLLVRCSIQRVETRPRSKKRKKIR
RQFPVYVLPKVEYQGCYGVEALTESELCRFWTESLLHSNCSFYVGHIDAFTSKLFMLEEIASEELKEKLA
ALKISSLFNILQHILKKLCSLQEGSYLLSHAAEDSSLLIYKTSDGKVTRTAYNLHKAHCDLPGVPSSLSV
PWVPLDPSYLLPYHIHHGRVPCTFPPKPLRPAAQAKVGGTRMPTRNHRNPVSMETKSSCLPVQQVENEGV
ARNKRKIM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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