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Report for CCDS22262.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22262.1 Public Mus musculus 8 Asah1 23 108 98 CCDS HistoryNCBI Gene:11886Re-query CCDS DB by CCDS ID:22262.1Re-query CCDS DB by GeneID:11886See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22262.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034000.14 ENSMUSP00000034000.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034000.14Link to Ensembl Protein Viewer:ENSMUSP00000034000.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000034000Re-query CCDS DB by Protein ID:ENSMUSP00000034000
Original member Current member NCBI NM_019734.3 NP_062708.1 Accepted alive Link to Nucleotide Sequence:NM_019734.3Link to Protein Sequence:NP_062708.1Re-query CCDS DB by Nucleotide ID:NM_019734Re-query CCDS DB by Protein ID:NP_062708Link to BLAST:NP_062708.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062708.1 394 Q9WV54 394 100% 0 0

Chromosomal Locations for CCDS 22262.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 41341596 41341685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41342885 41342941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41343519 41343642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41343730 41343861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41346107 41346188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41346296 41346350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41346931 41347075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41348088 41348133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41349550 41349624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41351894 41351972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41354014 41354100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41354827 41354917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41360253 41360299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41374510 41374584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1185 nt):
ATGCGGGGCCAAAGTCTTCTCACCTGGGTCCTAGCCGCGGCAGTCACCTGCGCCCAGGCACAGGATGTGC
CGCCGTGGACAGAAGATTGCAGAAAATCAACGTATCCTCCTTCTGGACCAACCTATAGAGGACCAGTTCC
GTGGCACACCATAAATCTTGATTTACCACCCTACAAAAGATGGCATGAATTATTGGCTCAAAAGGCACCA
GCGTTGAGGATTTTAGTGAATTCCATAACGAGTTTAGTGAATACATTTGTGCCAAGTGGAAAACTAATGA
AGATGGTGGATCAAAAGCTGCCTGGTATGATTGGCAGCCTTCCTGACCCTTTTGGAGAGGAAATGAGGGG
AATTGCAGATGTTACTGGGATTCCTCTAGGAGAGATTATTTCATTCAACATTTTCTATGAATTGTTTACC
ATGTGTACATCAATCATAACTGAAGATGAGAAAGGTCATTTACTACATGGGAGAAACATGGATTTTGGAA
TATTTCTTGGGTGGAATATAAATAATAACACTTGGGTTGTCACAGAAGAATTAAAGCCCTTAACAGTGAA
TTTGGACTTCCAAAGAAACAATAAGACTGTTTTCAAGGCTACAAGTTTTGTTGGATATGTGGGCATGTTG
ACAGGATTCAAACCAGGACTGTTCAGTCTTTCACTAAATGAACGTTTCAGTATAAATGGTGGTTATCTGG
GTATCCTAGAATGGATGTTCGGAAGGAAAGATGCCCAGTGGGTAGGGTTTATCACTCGATCAGTTCTGGA
AAACACCACAAGTTATGAAGAAGCCAAGAACACACTGACCAAGACCAAGATAATGGCGCCAGTATATTTT
ATCCTGGGAGGCAAGAAGTCTGGAGAGGGTTGTGTGATCACACGGGAAAGAAAAGAGTCTTTGGATGTCT
ATGAACTTGATCCTAAGCATGGCAGATGGTATGTGGTACAAACCAATTATGACAGGTGGAAAAACACCTT
GTTTATTGATGACCGCAGAACACCGGCCAAGAAGTGTCTAAATCACACCACACAGAAGAATCTCTCCTTT
GCTACCATCTATGATGTCCTATCAACAAAACCTGTCCTCAACAAGCTGACTGTATTCACAACCTTGATGG
ATGTTACCAAAGGTCAATTTGAAAGTCACCTTCGAGATTGCCCAGACCCTTGTATAGGCTGGTGA

Translation (394 aa):
MRGQSLLTWVLAAAVTCAQAQDVPPWTEDCRKSTYPPSGPTYRGPVPWHTINLDLPPYKRWHELLAQKAP
ALRILVNSITSLVNTFVPSGKLMKMVDQKLPGMIGSLPDPFGEEMRGIADVTGIPLGEIISFNIFYELFT
MCTSIITEDEKGHLLHGRNMDFGIFLGWNINNNTWVVTEELKPLTVNLDFQRNNKTVFKATSFVGYVGML
TGFKPGLFSLSLNERFSINGGYLGILEWMFGRKDAQWVGFITRSVLENTTSYEEAKNTLTKTKIMAPVYF
ILGGKKSGEGCVITRERKESLDVYELDPKHGRWYVVQTNYDRWKNTLFIDDRRTPAKKCLNHTTQKNLSF
ATIYDVLSTKPVLNKLTVFTTLMDVTKGQFESHLRDCPDPCIGW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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