NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS11692.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11692.1 Public Homo sapiens 17 COG1 24 110 108 CCDS HistoryNCBI Gene:9382Re-query CCDS DB by CCDS ID:11692.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11692.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299886.9 ENSP00000299886.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000299886.9Link to Ensembl Protein Viewer:ENSP00000299886.4Re-query CCDS DB by Nucleotide ID:ENST00000299886Re-query CCDS DB by Protein ID:ENSP00000299886
Original member Current member NCBI NM_018714.3 NP_061184.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018714.3Link to Protein Sequence:NP_061184.1Re-query CCDS DB by Nucleotide ID:NM_018714Re-query CCDS DB by Protein ID:NP_061184Link to BLAST:NP_061184.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061184.1 980 Q8WTW3 980 100% 0 0

Chromosomal Locations for CCDS 11692.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 73193070 73193384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73196507 73196751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73196900 73197081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73197226 73197396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73199865 73200021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73200566 73200776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73201109 73201900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73203000 73203146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73203632 73203793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73205553 73205680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73206154 73206262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73206708 73206817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73207181 73207256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 73208314 73208451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2943 nt):
ATGGCCACCGCGGCAACCTCACCCGCGCTGAAGCGGCTGGATCTGCGCGACCCTGCGGCTCTTTTCGAGA
CGCATGGAGCGGAGGAGATCCGCGGGCTGGAGCGCCAGGTTCGGGCCGAGATCGAGCACAAGAAGGAGGA
GCTGCGGCAGATGGTGGGCGAACGGTACCGCGACCTGATCGAGGCGGCCGACACCATCGGCCAGATGCGC
CGCTGCGCCGTGGGGCTAGTGGACGCCGTGAAGGCCACCGACCAGTACTGCGCCCGCCTCCGCCAGGCCG
GCTCGGCCGCGCCCCGGCCACCGCGGGCCCAGCAGCCACAGCAGCCATCCCAGGAGAAGTTCTACAGCAT
GGCTGCCCAGATCAAGCTACTCTTAGAAATTCCGGAGAAGATCTGGAGCTCGATGGAAGCCTCTCAGTGT
CTCCACGCCACACAGCTCTACCTGCTCTGCTGCCACCTCCACAGCCTGCTCCAGCTGGATTCTTCTAGTT
CCCGATACAGTCCCGTCCTCTCCCGGTTTCCTATACTCATCCGGCAGGTGGCAGCCGCCAGCCACTTCCG
GTCAACTATTCTGCATGAAAGCAAGATGTTGCTCAAATGCCAAGGTGTGTCTGACCAAGCTGTGGCCGAG
GCCCTGTGCTCTATAATGCTCTTAGAAGAGAGTTCTCCTCGCCAAGCCCTCACAGACTTCCTGCTGGCCA
GAAAGGCAACTATTCAGAAACTTCTCAACCAGCCACACCATGGTGCTGGTATCAAGGCTCAGATTTGCTC
ATTAGTGGAGTTGCTGGCCACCACTCTGAAGCAAGCTCATGCCCTTTTCTACACTTTGCCAGAAGGACTG
CTGCCAGATCCAGCCCTGCCATGTGGCTTGCTCTTCTCTACTCTGGAGACCATCACAGGCCAGCATCCTG
CCGGAAAGGGCACTGGTGTCCTGCAGGAAGAGATGAAACTCTGCAGCTGGTTTAAACACCTGCCAGCATC
CATCGTCGAGTTCCAGCCAACACTCCGAACCCTTGCACATCCCATCAGTCAGGAATACCTGAAAGACACG
CTGCAGAAATGGATCCACATGTGTAATGAAGACATTAAAAATGGGATCACCAACCTGCTCATGTACGTGA
AGAGCATGAAGGGTCTCGCGGGAATCCGGGACGCCATGTGGGAGTTACTTACCAATGAGTCCACCAATCA
CAGCTGGGATGTGCTATGTCGGCGGCTTCTGGAGAAGCCGCTCTTGTTCTGGGAAGATATGATGCAGCAA
CTGTTCCTTGACCGATTACAGACTCTGACAAAAGAAGGCTTTGACTCCATCTCCAGTAGCTCCAAGGAGC
TCTTGGTTTCAGCTTTGCAGGAACTTGAAAGCAGCACCAGCAACTCCCCTTCAAATAAGCACATCCACTT
TGAGTACAACATGTCGCTCTTCCTCTGGTCTGAGAGTCCTAATGACCTGCCTTCCGATGCGGCCTGGGTC
AGCGTGGCAAACCGGGGTCAGTTTGCCAGTAGCGGCCTCTCCATGAAAGCACAAGCCATCAGCCCTTGTG
TACAGAACTTCTGTTCTGCCCTGGATTCTAAGCTGAAGGTTAAACTAGATGACCTCCTGGCTTACCTCCC
CTCTGATGACTCATCACTGCCCAAGGACGTTTCTCCCACACAGGCCAAGAGTTCTGCCTTTGACAGATAC
GCAGATGCGGGGACCGTGCAGGAGATGCTGCGGACTCAGTCCGTGGCATGCATCAAGCACATCGTGGACT
GCATCCGGGCAGAGCTACAGAGCATTGAAGAGGGTGTGCAAGGGCAACAGGATGCCCTCAACAGTGCCAA
GCTGCACTCAGTTCTTTTCATGGCCAGACTCTGCCAGTCCCTGGGAGAGCTGTGCCCCCATCTGAAGCAG
TGCATCCTGGGAAAATCAGAGAGCTCAGAGAAACCAGCAAGGGAGTTTAGGGCTCTGAGAAAACAGGGAA
AGGTGAAAACTCAGGAAATCATTCCTACACAGGCCAAGTGGCAAGAGGTTAAAGAAGTACTCCTCCAGCA
GAGCGTGATGGGCTACCAGGTCTGGAGCAGTGCAGTTGTGAAAGTTTTGATTCATGGATTCACCCAGTCA
TTACTTCTAGATGATGCTGGCTCAGTTCTGGCCACAGCCACCAGCTGGGATGAGCTAGAAATTCAGGAGG
AGGCAGAGTCTGGCAGCAGTGTCACATCCAAGATCCGACTCCCTGCACAGCCGTCCTGGTATGTACAGTC
CTTCCTGTTTAGTTTATGCCAGGAAATTAATCGGGTTGGAGGCCATGCCTTGCCAAAGGTGACATTACAG
GAGATGCTGAAAAGCTGTATGGTTCAAGTAGTAGCTGCCTATGAGAAACTCTCCGAAGAAAAACAGATTA
AGAAAGAAGGTGCATTTCCAGTCACCCAGAACCGGGCGCTGCAGCTGCTTTATGATCTGCGTTACCTCAA
CATTGTTCTGACAGCCAAGGGTGACGAGGTGAAGAGTGGCCGGAGCAAGCCAGACTCCAGAATTGAGAAA
GTGACTGACCACCTGGAAGCCCTCATTGATCCATTTGACCTGGACGTTTTCACGCCACACCTCAACAGCA
ACCTTCATCGCCTGGTGCAGCGAACTTCTGTTCTGTTTGGATTGGTGACTGGTACAGAGAATCAGCTCGC
CCCCCGGAGCAGTACGTTCAACTCCCAAGAACCCCATAACATCCTGCCACTGGCATCCAGTCAGATCAGG
TTTGGACTTCTCCCACTGAGCATGACAAGCACTCGAAAGGCTAAATCAACCAGAAACATCGAAACAAAAG
CTCAGGTTGTCCCCCCGGCACGCTCCACAGCTGGTGACCCGACAGTTCCTGGCTCCTTGTTCAGACAGCT
TGTCAGTGAAGAAGACAACACGTCTGCACCTTCATTATTCAAACTTGGCTGGCTCTCTAGTATGACTAAG
TAA

Translation (980 aa):
MATAATSPALKRLDLRDPAALFETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLIEAADTIGQMR
RCAVGLVDAVKATDQYCARLRQAGSAAPRPPRAQQPQQPSQEKFYSMAAQIKLLLEIPEKIWSSMEASQC
LHATQLYLLCCHLHSLLQLDSSSSRYSPVLSRFPILIRQVAAASHFRSTILHESKMLLKCQGVSDQAVAE
ALCSIMLLEESSPRQALTDFLLARKATIQKLLNQPHHGAGIKAQICSLVELLATTLKQAHALFYTLPEGL
LPDPALPCGLLFSTLETITGQHPAGKGTGVLQEEMKLCSWFKHLPASIVEFQPTLRTLAHPISQEYLKDT
LQKWIHMCNEDIKNGITNLLMYVKSMKGLAGIRDAMWELLTNESTNHSWDVLCRRLLEKPLLFWEDMMQQ
LFLDRLQTLTKEGFDSISSSSKELLVSALQELESSTSNSPSNKHIHFEYNMSLFLWSESPNDLPSDAAWV
SVANRGQFASSGLSMKAQAISPCVQNFCSALDSKLKVKLDDLLAYLPSDDSSLPKDVSPTQAKSSAFDRY
ADAGTVQEMLRTQSVACIKHIVDCIRAELQSIEEGVQGQQDALNSAKLHSVLFMARLCQSLGELCPHLKQ
CILGKSESSEKPAREFRALRKQGKVKTQEIIPTQAKWQEVKEVLLQQSVMGYQVWSSAVVKVLIHGFTQS
LLLDDAGSVLATATSWDELEIQEEAESGSSVTSKIRLPAQPSWYVQSFLFSLCQEINRVGGHALPKVTLQ
EMLKSCMVQVVAAYEKLSEEKQIKKEGAFPVTQNRALQLLYDLRYLNIVLTAKGDEVKSGRSKPDSRIEK
VTDHLEALIDPFDLDVFTPHLNSNLHRLVQRTSVLFGLVTGTENQLAPRSSTFNSQEPHNILPLASSQIR
FGLLPLSMTSTRKAKSTRNIETKAQVVPPARSTAGDPTVPGSLFRQLVSEEDNTSAPSLFKLGWLSSMTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH