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Report for CCDS24860.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24860.1 Public Mus musculus 11 Glp2r 23 108 98 CCDS HistoryNCBI Gene:93896Re-query CCDS DB by CCDS ID:24860.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24860.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051765.8 ENSMUSP00000061560.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051765.8Link to Ensembl Protein Viewer:ENSMUSP00000061560.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000051765Re-query CCDS DB by Protein ID:ENSMUSP00000061560
Original member Current member NCBI NM_175681.3 NP_783612.2 Accepted alive Link to Nucleotide Sequence:NM_175681.3Link to Protein Sequence:NP_783612.2Re-query CCDS DB by Nucleotide ID:NM_175681Re-query CCDS DB by Protein ID:NP_783612Link to BLAST:NP_783612.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_783612.2 512 Q5IXF8 512 100% 0 0

Chromosomal Locations for CCDS 24860.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 67709483 67709809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67712296 67712337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67721957 67722095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67730632 67730720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67740108 67740177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67741028 67741088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67742195 67742354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67744862 67745015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67746707 67746819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67757491 67757612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67762696 67762800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67764758 67764848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67770807 67770872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1539 nt):
ATGCGTCGGCTCTGGGGCCCTGGGACGCCCTTCCTCGCCCTGCTTCTGCTGGTTTCCATCAAGCAAGTTA
CTACAGGATCTCTCCTTGAGGAGACAGTTCAGAAGTGGGCTCAGTATAAGGAGACGTGTCTGAAAGACTT
GCTCGAGAAACCTTCTGGTGTATTTTGTAATGGAACATTTGATAAGTACGTGTGCTGGCCTCATTCTTTT
CCTGGAAATGTCTCTGTCCCCTGTCCTTCATACTTACCTTGGTGGAATAAAGAGAGCCCAGGAAGGGCCT
ACAGACACTGCTTGGCTCAGGGGACTTGGCAGAAGCAAGAGAACTCCACAGATACTTGGCAGGATGAGTC
AGAATGCTCAGAGAACCACAGCTTCAAACAAAACGTGGATCACTATCACCATACCTTGTTGTCCACCTTG
CAGCTGATGTACACTGTGGGCTACTCCCTGTCTCTCATCTCCCTCTTCTTGGCTCTTACACTCTTCTTGT
TCCTTCGAAAACTGCACTGCACACGCAATTACATCCACATGAACCTGTTCGCTTCGTTCATCCTGAGAGC
TCTGGTTGTCCTTGTGAAGGACATGGTCTTCTACAACTCTTACTCCAGGAGGCCTGACAGTGAGAGTGGA
TGGATGTCATATCTGTCAGAGATTTCTGCCTCCTGCCGCTCTGTCCAGGTCCTCCTGCACTACTTTGTGG
GCACCAATCACTTGTGGTTGCTGGTTGAAGGACTTTACCTCCATGCTCTGCTGGAGCCAACAGTGCTTCC
TGAAAGGCGGCTGTGGCCCAAGTACCTGGTGGTGGGTTGGGCCTTCCCCATGCTGTTTGTTATTCCCTGG
ATTTTTGTCCGAGCAAGCCTGGAGAATACAGGGTGCTGGGCAGTAAATGAGAATAAGAAAATCTGGTGGA
TCATCAGAGGACCCATTCTGCTTTGTGTAACAGTTAATTTCTTCATCTTCCTCAAGATTCTCAAGCTTCT
CATTTCTAAGTTCAGAGCTCATCAGATGTGCTTCAGAGACTACAAATATAGACTGGCAAAATCAACCCTG
CTCCTCATTCTTTTGATGGGGGTTCATGAGTTCCTCTTCACTTTCTTCACCGACGACCAAGTTCAAGGAT
TTTCAAGACTTATTCGTCTCTTCATCCAGTTGACCCTGAGCTCCTTCCATGGATTTCTGGTGGCCTTGCA
GTACGGCTTTGCCAGTAGAGAGGTGAAGGCAGAGCTGAGAAAGACCTGGGGCCGCTTCTTATTAGCTCGC
CACTGGGGCTGCAGAGCCTGTGTCCTAGGGAAGAACTTCCGGTTCCTGGGGAAATGTTCCAAGAAGCTGT
CGGAGGGAGATGGTGCCGAGACACTCCAGAAGCTGCAATCTTCAGGTGTCAGCTCACACCTGACCGCTGG
GAACCTGCGGGATCATGGGGCACAGCCTCACAGGGGCCGTGGAGCTTGGCCCCGGGCAAGCAGCCTGTCT
GAGAGCAGCGAGGGAGACTTCACCCTGGCCAATACCATGGAGGAGATTCTGGAAGAGAGTGAGATCTAA

Translation (512 aa):
MRRLWGPGTPFLALLLLVSIKQVTTGSLLEETVQKWAQYKETCLKDLLEKPSGVFCNGTFDKYVCWPHSF
PGNVSVPCPSYLPWWNKESPGRAYRHCLAQGTWQKQENSTDTWQDESECSENHSFKQNVDHYHHTLLSTL
QLMYTVGYSLSLISLFLALTLFLFLRKLHCTRNYIHMNLFASFILRALVVLVKDMVFYNSYSRRPDSESG
WMSYLSEISASCRSVQVLLHYFVGTNHLWLLVEGLYLHALLEPTVLPERRLWPKYLVVGWAFPMLFVIPW
IFVRASLENTGCWAVNENKKIWWIIRGPILLCVTVNFFIFLKILKLLISKFRAHQMCFRDYKYRLAKSTL
LLILLMGVHEFLFTFFTDDQVQGFSRLIRLFIQLTLSSFHGFLVALQYGFASREVKAELRKTWGRFLLAR
HWGCRACVLGKNFRFLGKCSKKLSEGDGAETLQKLQSSGVSSHLTAGNLRDHGAQPHRGRGAWPRASSLS
ESSEGDFTLANTMEEILEESEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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