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Report for CCDS36990.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36990.1 Public Mus musculus 14 Diaph3 23 108 98 CCDS HistoryNCBI Gene:56419Re-query CCDS DB by CCDS ID:36990.1Re-query CCDS DB by GeneID:56419See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36990.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000168889.2 ENSMUSP00000129420.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168889.2Link to Ensembl Protein Viewer:ENSMUSP00000129420.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000168889Re-query CCDS DB by Protein ID:ENSMUSP00000129420
Original member Current member NCBI NM_019670.2 NP_062644.1 Accepted alive Link to Nucleotide Sequence:NM_019670.2Link to Protein Sequence:NP_062644.1Re-query CCDS DB by Nucleotide ID:NM_019670Re-query CCDS DB by Protein ID:NP_062644Link to BLAST:NP_062644.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062644.1 1171 Q9Z207 1171 100% 0 0

Chromosomal Locations for CCDS 36990.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 86656323 86656582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86772086 86772145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86772607 86772702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86810336 86810471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86828992 86829156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86834977 86835101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86852072 86852201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86866403 86866642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86905937 86906038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86910029 86910123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86918769 86918864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86965442 86965556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86966325 86966633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86969449 86969553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86978614 86978678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86981571 86981689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86984782 86984898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86985620 86985738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 86986015 86986125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 87000009 87000114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 87002802 87002938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 87007175 87007244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 87007326 87007400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 87037456 87037586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 87073282 87073386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 87090978 87091154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 87115014 87115046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 87140998 87141114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3516 nt):
ATGGAGAGGCACCGGGCGCGCGCTCTCGGCCGGGACAGCAAGTCGTCGCGGAGGAAGGGCTTGCAGTCCG
CGCCGCCCGCTGGCCCCTACGAGCCCGGGGAGAAGCGACCCAAGTTGCATTTAAATATTAGAACACTGAC
AGATGATATGCTGGACAAATTTGCCAGTATAAGAATTCCAGGGAGCAAGAAAGAGAGACCTCCCCTTCCC
CACCTGAAGACTGTGTCTGGGATCAGTGACAGCTCATCACTGTCCTCAGAGACAATGGAAAACAACCCAA
AGGCGCTGCCAGAGAGTGAAGTCTTGAAGCTTTTTGAGAAGATGATGGAAGATATGAATTTAAATGAAGA
TAAAAAGGCACCATTGCGGGAAAAAGACTTCGGTATCAAAAAAGAAATGGTGATGCAGTACATTAATACT
GCTTCTAAGACAGGAAGTCTTAGAAGTAGCCGACAGATCTCACCTCAGGAATTTCTCCATGAGCTGAAAA
TGGGTTACACAGACGAGAGACTTTTCACGTATCTGGAGTCACTCCGAGTATCATTGACCAGTCATCCTGT
GAGTTGGGTGCAAAGCTTTGGACACGAGGGACTCGGATTATTGCTGGACATTTTGGAAAAACTAATTAAT
GGGCAAATCCAAGAAAAAGTTGTGAAGAAGACTCAGCACAAAGTCATCCAGTGTCTGAGAGCCCTGATGA
ACACACAGTATGGCTTAGAAAGGATTATGAGTGACAAGAGGAGTCTTTCCTTGTTGGCAAAAGCCATGGA
TCCCAGGCAGCCCGCTATGATGGCAGACGTGGTGAAGCTTCTGTCTGCAGTGTGCATTGTCGGCGAGGAA
AGCATCCTTGAAGAAGTGTTAGAAGCCTTGACTTCAGCTGGAGAAGAAAGAAAGATTGACAGATTTTTTT
CCATTGTGGAAGGCCTCCGGCATAACTCAGTGAACCTGCAAGTTGCTTGTATGCAGCTCATAAATGCTCT
CGTTACATCTCCTGATGATTTGGACTTCAGGCTTCACCTCAGAAATGAATTTATGCGTTGTGGATTGAAA
GAGATATTGCCAAACTTAAAGGGCATTAAGAATGATGGCCTGGATATACAACTTAAAGTCTTTGATGAGC
ACAAAGAAGAAGATTTGAGTGAGTTTTTCCATCGCCTTGAAGACATTAGAGCTGAACTTGATGAAGCATC
TGATGTTTACAGCATGTTATGGGACACAGTTAAGGAAACTCGAGCAGAGGGACATTTTCTTTCTATTCTT
CAGCATCTCCTGCTCATTCGCAATGATCGTTTTATAAGAGAGCAGTATTTCAAATTAATTGATGAGTGTG
TGTCACAGATTGTATTACATAGAGATGGAACGGACCCTGACTTCACATACAGAAAAAGACTAGATTTGGA
CTTAAGTCAGTTTGTAGATGTTTGCATAGATCAGGCCAAACTAGATGAGTGGGAAGAGAAAGCATCCGAA
CATTGCAAGAAATTTGAAAAAGAGTGTACTGACCACCAAGAAACCCAGGCTCAATTGCAGAAAAGAGAGG
CAAAGATTAATGAGCTTCAAGCAGAGTTACAAGCTTTTAAATCCCAGTTTGGTGCCTTGCCACCTGGTAC
AAAAATTCCTTTGCAACCTTCAGTAGAAGGTGAAGCTGGCCCTTCAGCCCTTCCTCCTGCCCCACCAGCA
CTCAGTGGAGGAGTGCCGCCTCCCCCACCGCCCCCTCCTCCACCACCCCCACCACTCCCAGGAATGCCAA
TGCCATTTGGTGGCCCTGTACCACCACCACCTCCTCTGGGATTCCTGGGTGGGCAAAGCTCTATTCCATT
AAACCTGCCATTTGGTTTGAAACCAAAGAAAGAATTTAAGCCTGAAATCAGCATGAGAAGATTGAATTGG
TTAAAGATCGGACCAAATGAAATGTCTGAGAACTGCTTCTGGATCAAAGTAAATGAAAATAAGTATGAAA
ATAGGGATTTGCTTTGTAAACTTGAGAACACTTTTTGTTGCCAAGAAAAAGAGAAAAGGAATACAAATGA
CTTTGATGAGAAGAAAGTTATTAAGAAGAGAATGAAGGAACTTAAATTTCTAGATCCTAAAATTGCTCAG
AACCTTTCAATCTTCCTGAGCTCCTTCCGGGTGCCATATGAGAAAATCAGGACGATGATATTGGAAGTGG
ATGAAACACAGTTGTCAGAGTCCATGATTCAGAACTTAATAAAGCACCTTCCTGATGAGGAGCAGTTGAA
GTCATTGTCCCAGTTTAGAAGTGACTATAACAGTTTGTGTGAGCCTGAGCAGTTCGCTGTTGTGATGAGC
AATGTGAAGAGACTCCGGCCACGGCTCAGTGCTATTCTCTTTAAGCTTCAATTTGAAGAGCAGGTGAACA
ACATCAAACCTGACATCATGGCTGTCAGTACTGCCTGCGAGGAGATCAAGAAGAGCAAAGGCTTTAGCAA
GTTGCTGGAACTTGTGTTGCTAATGGGAAACTACATGAATGCTGGCTCCCGGAATGCTCAAACCTTCGGA
TTTGACCTTAGCTCTCTCTGTAAACTGAAGGATACAAAATCTGCAGATCAGAAAACCACACTCCTCCATT
TCCTGGTAGATGTATGTGAAGAAAAGCATGCTGACATCCTTCACTTTGTGGACGATTTGGCACATTTAGA
CAAAGCTAGCAGAGTCTCTGTAGAAATGCTGGAAAAGAACGTGAAGCAGATGGGAAGGCAGCTTCAACAG
CTTGAGAAGAATTTGGAAACCTTTCCCCCTCCTGAGGACTTGCATGACAAGTTTGTGATAAAGATGTCCA
GCTTCGTTATCAGTGCGAACGAGCAGTATGAAAAACTCTCCACACTACTGGGCAGCATGACACAATTGTA
CCAGAGTATAATGGGCTACTATGCTGTCGACATGAAGAAGGTTTCCGTGGAAGAGTTTTTTAATGATCTG
AACAACTTCAGAACTTCATTTATGCTAGCATTAAAGGAAAACATCAAAAAACGAGAAGCAGCAGAAAAGG
AGAAACGTGCCAGGATAGCGAAAGAGCGAGCAGAGAAAGAGCGACTTGAACGCCAGCAAGAGAAAAAGCG
CTTACTAGAAATGAAAACTGAGGGAGATGAGACAGGAGTGATGGATAGTCTGCTGGAGGCCTTGCAGTCA
GGGGCTGCCTTCCGCGACAGAAGAAAAAGGACACCAAAGCTGAAAGATATTCGGCAGAGTCTCAGCCCGA
TGTCTCAGAGGCCTGTTCTCAAAGTTTGTAACCATGAAAATCAGAAAATGCAGTTGACAGAAGGGTCACG
TCCACACCACAGTATCAATTGCAACTCCACCAGGACTCCAGTCGCCAAGGAGCTTAATTATAATCTAGAC
ACTCATGCGTCTACAGGGAGGATCAAGGCAGTTGAGAAGGAAGCCTGTAATGCAGAAAGCAACAAAAAAA
AGGAAATGGAACTTCTTGGCTCTGTTGCTAAAAGCGAATCAGTTCCTGAAGTTGAAGCCCTGCTGGCAAG
ATTACGAGCTTTATAA

Translation (1171 aa):
MERHRARALGRDSKSSRRKGLQSAPPAGPYEPGEKRPKLHLNIRTLTDDMLDKFASIRIPGSKKERPPLP
HLKTVSGISDSSSLSSETMENNPKALPESEVLKLFEKMMEDMNLNEDKKAPLREKDFGIKKEMVMQYINT
ASKTGSLRSSRQISPQEFLHELKMGYTDERLFTYLESLRVSLTSHPVSWVQSFGHEGLGLLLDILEKLIN
GQIQEKVVKKTQHKVIQCLRALMNTQYGLERIMSDKRSLSLLAKAMDPRQPAMMADVVKLLSAVCIVGEE
SILEEVLEALTSAGEERKIDRFFSIVEGLRHNSVNLQVACMQLINALVTSPDDLDFRLHLRNEFMRCGLK
EILPNLKGIKNDGLDIQLKVFDEHKEEDLSEFFHRLEDIRAELDEASDVYSMLWDTVKETRAEGHFLSIL
QHLLLIRNDRFIREQYFKLIDECVSQIVLHRDGTDPDFTYRKRLDLDLSQFVDVCIDQAKLDEWEEKASE
HCKKFEKECTDHQETQAQLQKREAKINELQAELQAFKSQFGALPPGTKIPLQPSVEGEAGPSALPPAPPA
LSGGVPPPPPPPPPPPPPLPGMPMPFGGPVPPPPPLGFLGGQSSIPLNLPFGLKPKKEFKPEISMRRLNW
LKIGPNEMSENCFWIKVNENKYENRDLLCKLENTFCCQEKEKRNTNDFDEKKVIKKRMKELKFLDPKIAQ
NLSIFLSSFRVPYEKIRTMILEVDETQLSESMIQNLIKHLPDEEQLKSLSQFRSDYNSLCEPEQFAVVMS
NVKRLRPRLSAILFKLQFEEQVNNIKPDIMAVSTACEEIKKSKGFSKLLELVLLMGNYMNAGSRNAQTFG
FDLSSLCKLKDTKSADQKTTLLHFLVDVCEEKHADILHFVDDLAHLDKASRVSVEMLEKNVKQMGRQLQQ
LEKNLETFPPPEDLHDKFVIKMSSFVISANEQYEKLSTLLGSMTQLYQSIMGYYAVDMKKVSVEEFFNDL
NNFRTSFMLALKENIKKREAAEKEKRARIAKERAEKERLERQQEKKRLLEMKTEGDETGVMDSLLEALQS
GAAFRDRRKRTPKLKDIRQSLSPMSQRPVLKVCNHENQKMQLTEGSRPHHSINCNSTRTPVAKELNYNLD
THASTGRIKAVEKEACNAESNKKKEMELLGSVAKSESVPEVEALLARLRAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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