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Report for CCDS83357.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83357.1 Public Homo sapiens 9 LOC730098 24 110 108 CCDS HistoryNCBI Gene:730098Re-query CCDS DB by CCDS ID:83357.1Re-query CCDS DB by GeneID:730098See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83357.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000544078.2 ENSP00000452132.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544078.2Link to Ensembl Protein Viewer:ENSP00000452132.1Re-query CCDS DB by Nucleotide ID:ENST00000544078Re-query CCDS DB by Protein ID:ENSP00000452132
Original member Current member EBI ENST00000421828.7 ENSP00000457701.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000421828.7Link to Ensembl Protein Viewer:ENSP00000457701.1Re-query CCDS DB by Nucleotide ID:ENST00000421828Re-query CCDS DB by Protein ID:ENSP00000457701
Original member Current member NCBI NM_001320037.2 NP_001306966.1 Accepted alive Link to Nucleotide Sequence:NM_001320037.2Link to Protein Sequence:NP_001306966.1Re-query CCDS DB by Nucleotide ID:NM_001320037Re-query CCDS DB by Protein ID:NP_001306966Link to BLAST:NP_001306966.1
Original member Current member NCBI NM_001320038.2 NP_001306967.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001320038.2Link to Protein Sequence:NP_001306967.1Re-query CCDS DB by Nucleotide ID:NM_001320038Re-query CCDS DB by Protein ID:NP_001306967Link to BLAST:NP_001306967.1

Chromosomal Locations for CCDS 83357.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 34665034 34665190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 34665314 34665373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 34665613 34665659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (264 nt):
ATGTCGGGAATGAGGAGATACGAGGTGGCGCTGGAGGCGGAGGAGGAGATCTACTGGGGCTGTTTCTACT
TTTTCCCCTGGCTTCGCATGTGGCGGAGGGAGCGGAGCTCGGCGCACCCCGGGGAGCAGAAGCTGGAGCC
TCTGCGAGGCCTGATGAGCTGTCTGTCCAGCGGCCTGGGTCCTACTCCCCAGCGCTCGGGTCGTGGCTTC
CCCCGCCGCAGCCCCACCGCCGCTGCCCAGCCAGCCAGTGCATTAAAGATTTAA

Translation (87 aa):
MSGMRRYEVALEAEEEIYWGCFYFFPWLRMWRRERSSAHPGEQKLEPLRGLMSCLSSGLGPTPQRSGRGF
PRRSPTAAAQPASALKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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