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Report for CCDS32307.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32307.1 Public Homo sapiens 15 ARNT2 24 110 108 CCDS HistoryNCBI Gene:9915Re-query CCDS DB by CCDS ID:32307.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32307.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000303329.9 ENSP00000307479.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000303329.9Link to Ensembl Protein Viewer:ENSP00000307479.4Re-query CCDS DB by Nucleotide ID:ENST00000303329Re-query CCDS DB by Protein ID:ENSP00000307479
Original member Current member NCBI NM_014862.4 NP_055677.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014862.4Link to Protein Sequence:NP_055677.3Re-query CCDS DB by Nucleotide ID:NM_014862Re-query CCDS DB by Protein ID:NP_055677Link to BLAST:NP_055677.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055677.3 717 Q9HBZ2-1 717 100% 0 0

Chromosomal Locations for CCDS 32307.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 80404516 80404546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80450880 80450994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80457929 80457976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80470218 80470431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80475010 80475223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80508156 80508258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80513911 80513976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80514320 80514405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80551199 80551275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80552640 80552774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80555065 80555139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80563088 80563239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80574148 80574220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80574987 80575110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80576866 80576965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80580411 80580549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80581239 80581404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80591568 80591704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80593600 80593698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2154 nt):
ATGGCAACCCCGGCGGCGGTCAACCCTCCGGAAATGGCTTCAGACATACCTGGATCTGTGACGTTGCCCG
TTGCCCCCATGGCGGCCACCGGACAGGTGAGGATGGCGGGGGCCATGCCTGCCCGTGGAGGAAAGCGGCG
TTCCGGAATGGACTTCGATGATGAAGATGGTGAAGGCCCCAGTAAATTTTCAAGAGAGAATCATAGTGAA
ATCGAAAGGCGCAGACGGAACAAGATGACTCAGTACATCACGGAGCTCTCCGACATGGTCCCCACATGCA
GCGCACTGGCTCGGAAGCCAGACAAGCTCACCATCCTCCGCATGGCCGTCTCGCACATGAAGTCCATGAG
GGGTACAGGGAACAAGTCCACCGATGGCGCGTACAAGCCTTCCTTCCTCACAGAGCAGGAACTGAAGCAT
CTCATCCTTGAAGCAGCTGATGGATTTCTGTTTGTGGTGGCTGCTGAGACAGGGCGAGTGATTTATGTGT
CTGACTCCGTCACCCCTGTTCTGAACCAGCCCCAGTCAGAGTGGTTTGGGAGCACACTGTATGAACAGGT
GCATCCTGATGACGTGGAGAAGCTGAGAGAGCAACTGTGCACCTCAGAAAACTCAATGACAGGCCGGATC
TTGGACCTGAAGACTGGGACGGTCAAGAAAGAAGGGCAGCAGTCATCCATGAGGATGTGCATGGGCTCGC
GGCGGTCTTTCATCTGCAGGATGAGGTGTGGAAATGCTCCTTTGGACCACCTTCCTCTAAACAGAATAAC
CACCATGAGGAAAAGGTTCAGGAATGGCCTTGGCCCTGTGAAAGAAGGAGAAGCCCAATATGCTGTGGTC
CACTGTACAGGATACATCAAGGCCTGGCCACCAGCAGGAATGACCATACCTGAAGAAGACGCTGATGTGG
GACAAGGCAGTAAATATTGCCTCGTGGCAATTGGGAGACTCCAGGTGACCAGCTCTCCTGTATGCATGGA
CATGAATGGGATGTCGGTGCCCACAGAGTTCTTATCCCGGCATAACTCCGATGGAATCATCACATTTGTG
GATCCAAGATGTATCAGTGTGATTGGCTACCAACCCCAGGATCTTCTGGGAAAGGACATTTTGGAATTCT
GCCACCCTGAGGATCAAAGCCATCTGCGTGAGAGCTTCCAGCAGGTGGTTAAGCTGAAAGGCCAAGTCCT
GTCGGTCATGTATCGATTTCGCACCAAGAACCGGGAGTGGATGTTGATCCGCACCAGCAGCTTCACATTC
CAGAATCCCTATTCTGATGAGATTGAGTACATCATCTGCACCAACACCAACGTCAAGCAACTTCAGCAAC
AGCAGGCAGAATTGGAAGTGCACCAGAGAGATGGATTGTCATCGTATGACTTATCCCAGGTCCCCGTCCC
CAACCTACCAGCCGGTGTTCATGAGGCCGGGAAGTCCGTGGAAAAGGCGGATGCAATCTTCTCCCAGGAA
AGAGATCCTCGGTTTGCTGAAATGTTTGCAGGAATTAGTGCATCGGAGAAGAAGATGATGAGCTCAGCCT
CTGCAGCAGGAACCCAGCAGATCTACTCCCAAGGAAGCCCATTTCCCTCTGGACACTCCGGGAAGGCCTT
CAGCTCTTCAGTGGTTCATGTGCCTGGAGTGAATGATATTCAGTCCTCTTCTTCCACGGGCCAGAACATG
TCCCAAATCTCCCGGCAGCTAAACCAGAGTCAGGTGGCATGGACAGGGAGTCGTCCGCCCTTTCCGGGAC
AGCAAATCCCATCTCAGTCCAGCAAGACTCAGTCATCTCCCTTTGGGATTGGAACGAGCCACACCTACCC
GGCAGACCCCTCTTCCTACAGCCCCCTCTCCAGCCCAGCTACCTCCTCGCCAAGTGGGAATGCCTACTCC
AGTCTTGCCAACAGGACTCCAGGGTTCGCTGAAAGTGGACAAAGTAGCGGGCAGTTCCAAGGGCGGCCCT
CGGAAGTCTGGTCGCAGTGGCAAAGCCAGCACCATGGCCAGCAGAGCGGTGAGCAGCACTCCCACCAGCA
GCCCGGTCAGACTGAAGTGTTCCAGGACATGCTGCCCATGCCAGGAGATCCAACCCAGGGGACTGGCAAC
TATAACATCGAAGACTTTGCCGACCTGGGCATGTTTCCACCGTTTTCTGAGTAG

Translation (717 aa):
MATPAAVNPPEMASDIPGSVTLPVAPMAATGQVRMAGAMPARGGKRRSGMDFDDEDGEGPSKFSRENHSE
IERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNKSTDGAYKPSFLTEQELKH
LILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRI
LDLKTGTVKKEGQQSSMRMCMGSRRSFICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVV
HCTGYIKAWPPAGMTIPEEDADVGQGSKYCLVAIGRLQVTSSPVCMDMNGMSVPTEFLSRHNSDGIITFV
DPRCISVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRTKNREWMLIRTSSFTF
QNPYSDEIEYIICTNTNVKQLQQQQAELEVHQRDGLSSYDLSQVPVPNLPAGVHEAGKSVEKADAIFSQE
RDPRFAEMFAGISASEKKMMSSASAAGTQQIYSQGSPFPSGHSGKAFSSSVVHVPGVNDIQSSSSTGQNM
SQISRQLNQSQVAWTGSRPPFPGQQIPSQSSKTQSSPFGIGTSHTYPADPSSYSPLSSPATSSPSGNAYS
SLANRTPGFAESGQSSGQFQGRPSEVWSQWQSQHHGQQSGEQHSHQQPGQTEVFQDMLPMPGDPTQGTGN
YNIEDFADLGMFPPFSE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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