NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS30587.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30587.1 Public Homo sapiens 1 MFN2 24 110 108 CCDS HistoryNCBI Gene:9927Re-query CCDS DB by CCDS ID:30587.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30587.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000235329.10 ENSP00000235329.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000235329.10Link to Ensembl Protein Viewer:ENSP00000235329.5Re-query CCDS DB by Nucleotide ID:ENST00000235329Re-query CCDS DB by Protein ID:ENSP00000235329
Original member Current member EBI ENST00000444836.5 ENSP00000416338.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000444836.5Link to Ensembl Protein Viewer:ENSP00000416338.1Re-query CCDS DB by Nucleotide ID:ENST00000444836Re-query CCDS DB by Protein ID:ENSP00000416338
Original member Current member EBI ENST00000675053.1 ENSP00000501646.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675053.1Link to Ensembl Protein Viewer:ENSP00000501646.1Re-query CCDS DB by Nucleotide ID:ENST00000675053Re-query CCDS DB by Protein ID:ENSP00000501646
Original member Current member EBI ENST00000674910.1 ENSP00000501716.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674910.1Link to Ensembl Protein Viewer:ENSP00000501716.1Re-query CCDS DB by Nucleotide ID:ENST00000674910Re-query CCDS DB by Protein ID:ENSP00000501716
Original member Current member EBI ENST00000675919.1 ENSP00000501776.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675919.1Link to Ensembl Protein Viewer:ENSP00000501776.1Re-query CCDS DB by Nucleotide ID:ENST00000675919Re-query CCDS DB by Protein ID:ENSP00000501776
Original member Current member EBI ENST00000674817.1 ENSP00000502151.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674817.1Link to Ensembl Protein Viewer:ENSP00000502151.1Re-query CCDS DB by Nucleotide ID:ENST00000674817Re-query CCDS DB by Protein ID:ENSP00000502151
Original member Current member EBI ENST00000674548.1 ENSP00000502185.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674548.1Link to Ensembl Protein Viewer:ENSP00000502185.1Re-query CCDS DB by Nucleotide ID:ENST00000674548Re-query CCDS DB by Protein ID:ENSP00000502185
Original member Current member EBI ENST00000676293.1 ENSP00000502362.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676293.1Link to Ensembl Protein Viewer:ENSP00000502362.1Re-query CCDS DB by Nucleotide ID:ENST00000676293Re-query CCDS DB by Protein ID:ENSP00000502362
Original member Current member EBI ENST00000675231.1 ENSP00000502404.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675231.1Link to Ensembl Protein Viewer:ENSP00000502404.1Re-query CCDS DB by Nucleotide ID:ENST00000675231Re-query CCDS DB by Protein ID:ENSP00000502404
Original member Current member EBI ENST00000675113.1 ENSP00000502623.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675113.1Link to Ensembl Protein Viewer:ENSP00000502623.1Re-query CCDS DB by Nucleotide ID:ENST00000675113Re-query CCDS DB by Protein ID:ENSP00000502623
Original member Current member NCBI NM_001127660.2 NP_001121132.1 Accepted alive Link to Nucleotide Sequence:NM_001127660.2Link to Protein Sequence:NP_001121132.1Re-query CCDS DB by Nucleotide ID:NM_001127660Re-query CCDS DB by Protein ID:NP_001121132Link to BLAST:NP_001121132.1
Original member Current member NCBI NM_014874.4 NP_055689.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014874.4Link to Protein Sequence:NP_055689.1Re-query CCDS DB by Nucleotide ID:NM_014874Re-query CCDS DB by Protein ID:NP_055689Link to BLAST:NP_055689.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001121132.1 757 O95140-1 757 100% 0 0
NP_055689.1 757 O95140-1 757 100% 0 0

Chromosomal Locations for CCDS 30587.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 11989169 11989343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11992555 11992690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11996156 11996318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11997297 11997421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11998770 11998878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11998988 11999095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12001401 12001554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12001769 12001836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12001982 12002103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12003992 12004118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12004509 12004613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12004825 12004927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12005711 12005931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12006538 12006693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12007053 12007249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12009592 12009726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12011496 12011565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2274 nt):
ATGTCCCTGCTCTTCTCTCGATGCAACTCTATCGTCACAGTCAAGAAAAATAAGAGACACATGGCTGAGG
TGAATGCATCCCCACTTAAGCACTTTGTCACTGCCAAGAAGAAGATCAATGGCATTTTTGAGCAGCTGGG
GGCCTACATCCAGGAGAGCGCCACCTTCCTTGAAGACACGTACAGGAATGCAGAACTGGACCCCGTTACC
ACAGAAGAACAGGTTCTGGACGTCAAAGGTTACCTATCCAAAGTGAGAGGCATCAGTGAGGTGCTGGCTC
GGAGGCACATGAAAGTGGCTTTTTTTGGCCGGACGAGCAATGGGAAGAGCACCGTGATCAATGCCATGCT
CTGGGACAAAGTTCTGCCCTCTGGGATTGGCCACACCACCAATTGCTTCCTGCGGGTAGAGGGCACAGAT
GGCCATGAGGCCTTTCTCCTTACCGAGGGCTCAGAGGAAAAGAGGAGTGCCAAGACTGTGAACCAGCTGG
CCCATGCCCTCCACCAGGACAAGCAGCTCCATGCCGGCAGCCTAGTGAGTGTGATGTGGCCCAACTCTAA
GTGCCCACTTCTGAAGGATGACCTCGTTTTGATGGACAGCCCTGGTATTGATGTCACCACAGAGCTGGAC
AGCTGGATTGACAAGTTTTGTCTGGATGCTGATGTGTTTGTGCTGGTGGCCAACTCAGAGTCCACCCTGA
TGCAGACGGAAAAGCACTTCTTCCACAAGGTGAGTGAGCGTCTCTCCCGGCCAAACATCTTCATCCTGAA
CAACCGCTGGGATGCATCTGCCTCAGAGCCCGAGTACATGGAGGAGGTGCGGCGGCAGCACATGGAGCGT
TGTACCAGCTTCCTGGTGGATGAGCTGGGCGTGGTGGATCGATCCCAGGCCGGGGACCGCATCTTCTTTG
TGTCTGCTAAGGAGGTGCTCAACGCCAGGATTCAGAAAGCCCAGGGCATGCCTGAAGGAGGGGGCGCTCT
CGCAGAAGGCTTTCAAGTGAGGATGTTTGAGTTTCAGAATTTTGAGAGGAGATTTGAGGAGTGCATCTCC
CAGTCTGCAGTGAAGACCAAGTTTGAGCAGCACACGGTCCGGGCCAAGCAGATTGCAGAGGCGGTTCGAC
TCATCATGGACTCCCTGCACATGGCGGCTCGGGAGCAGCAGGTTTACTGCGAGGAAATGCGTGAAGAGCG
GCAAGACCGACTGAAATTTATTGACAAACAGCTGGAGCTCTTGGCTCAAGACTATAAGCTGCGAATTAAG
CAGATTACGGAGGAAGTGGAGAGGCAGGTGTCGACTGCAATGGCCGAGGAGATCAGGCGCCTCTCTGTAC
TGGTGGACGATTACCAGATGGACTTCCACCCTTCTCCAGTAGTCCTCAAGGTTTATAAGAATGAGCTGCA
CCGCCACATAGAGGAAGGACTGGGTCGAAACATGTCTGACCGCTGCTCCACGGCCATCACCAACTCCCTG
CAGACCATGCAGCAGGACATGATAGATGGCTTGAAACCCCTCCTTCCTGTGTCTGTGCGGAGTCAGATAG
ACATGCTGGTCCCACGCCAGTGCTTCTCCCTCAACTATGACCTAAACTGTGACAAGCTGTGTGCTGACTT
CCAGGAAGACATTGAGTTCCATTTCTCTCTCGGATGGACCATGCTGGTGAATAGGTTCCTGGGCCCCAAG
AACAGCCGTCGGGCCTTGATGGGCTACAATGACCAGGTCCAGCGTCCCATCCCTCTGACGCCAGCCAACC
CCAGCATGCCCCCACTGCCACAGGGCTCGCTCACCCAGGAGGAGTTCATGGTTTCCATGGTTACCGGCCT
GGCCTCCTTGACATCCAGGACCTCCATGGGCATTCTTGTTGTTGGAGGAGTGGTGTGGAAGGCAGTGGGC
TGGCGGCTCATTGCCCTCTCCTTTGGGCTCTATGGCCTCCTCTACGTCTATGAGCGTCTGACCTGGACCA
CCAAGGCCAAGGAGAGGGCCTTCAAGCGCCAGTTTGTGGAGCATGCCAGCGAGAAGCTGCAGCTTGTCAT
CAGCTACACTGGCTCCAACTGCAGCCACCAAGTCCAGCAGGAACTGTCTGGGACCTTTGCTCATCTGTGT
CAGCAAGTTGACGTCACCCGGGAGAACCTGGAGCAGGAAATTGCCGCCATGAACAAGAAAATTGAGGTTC
TTGACTCACTTCAGAGCAAAGCAAAGCTGCTCAGGAATAAAGCCGGTTGGTTGGACAGTGAGCTCAACAT
GTTCACACACCAGTACCTGCAGCCCAGCAGATAG

Translation (757 aa):
MSLLFSRCNSIVTVKKNKRHMAEVNASPLKHFVTAKKKINGIFEQLGAYIQESATFLEDTYRNAELDPVT
TEEQVLDVKGYLSKVRGISEVLARRHMKVAFFGRTSNGKSTVINAMLWDKVLPSGIGHTTNCFLRVEGTD
GHEAFLLTEGSEEKRSAKTVNQLAHALHQDKQLHAGSLVSVMWPNSKCPLLKDDLVLMDSPGIDVTTELD
SWIDKFCLDADVFVLVANSESTLMQTEKHFFHKVSERLSRPNIFILNNRWDASASEPEYMEEVRRQHMER
CTSFLVDELGVVDRSQAGDRIFFVSAKEVLNARIQKAQGMPEGGGALAEGFQVRMFEFQNFERRFEECIS
QSAVKTKFEQHTVRAKQIAEAVRLIMDSLHMAAREQQVYCEEMREERQDRLKFIDKQLELLAQDYKLRIK
QITEEVERQVSTAMAEEIRRLSVLVDDYQMDFHPSPVVLKVYKNELHRHIEEGLGRNMSDRCSTAITNSL
QTMQQDMIDGLKPLLPVSVRSQIDMLVPRQCFSLNYDLNCDKLCADFQEDIEFHFSLGWTMLVNRFLGPK
NSRRALMGYNDQVQRPIPLTPANPSMPPLPQGSLTQEEFMVSMVTGLASLTSRTSMGILVVGGVVWKAVG
WRLIALSFGLYGLLYVYERLTWTTKAKERAFKRQFVEHASEKLQLVISYTGSNCSHQVQQELSGTFAHLC
QQVDVTRENLEQEIAAMNKKIEVLDSLQSKAKLLRNKAGWLDSELNMFTHQYLQPSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH