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Report for CCDS16501.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16501.1 Public Mus musculus 2 Dnajc24 23 108 98 CCDS HistoryNCBI Gene:99349Re-query CCDS DB by CCDS ID:16501.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16501.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102555.10 ENSMUSP00000099615.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102555.10Link to Ensembl Protein Viewer:ENSMUSP00000099615.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000102555Re-query CCDS DB by Protein ID:ENSMUSP00000099615
Original member Current member NCBI NM_026992.3 NP_081268.1 Accepted alive Link to Nucleotide Sequence:NM_026992.3Link to Protein Sequence:NP_081268.1Re-query CCDS DB by Nucleotide ID:NM_026992Re-query CCDS DB by Protein ID:NP_081268Link to BLAST:NP_081268.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081268.1 148 Q91ZF0 148 100% 0 0

Chromosomal Locations for CCDS 16501.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 105966964 105967094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105970448 105970516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105980982 105981120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 106001929 106002036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (447 nt):
ATGGCTTTGGAGCAGACACTCAAAAAGGATTGGTACAGCATTCTGGGTGCAGACCCATCTGCAAATATGT
CA
GACCTAAAACAAAAATATCAGAAACTCATATTACTGTATCATCCAGATAAACAAAGTGCAGATGTGCC
A
GCTGGAACCATGGAGGAGTGTATGCAGAAGTTTATTGAAATTGATCAGGCATGGAAAATTCTAGGGAAT
GAA
GAAACCAAGAAAAAGTATGACCTGCAGCGGCATGAAGATGAGCTAAGAAATGTGGGGCCAGTAGATG
CA
CAGGTGCGCCTTGAAGAGATGTCCTGGAACCAAGGTGATGAATCTTTCTTTCTGAGCTGTCGATGTGG
T
GGGAAATACACTGTCTCCAAGGATGAAGCACAAGAAGCCACCCTCATCTCCTGTGACGCGTGCTCGCTG
ATT
GTGGAGCTCCTCCATCAGAGCTGA


Translation (148 aa):
MALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGN
E
ETKKKYDLQRH
EDELRNVGPVDAQVRLEEMSWNQGDESFFLSCRCGGKYTVSKDEAQEATLISCDACSL
I
VELLHQS




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser