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Report for CCDS11165.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11165.1 Public Homo sapiens 17 HS3ST3A1 24 110 108 CCDS HistoryNCBI Gene:9955Re-query CCDS DB by CCDS ID:11165.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11165.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000284110.2 ENSP00000284110.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000284110.2Link to Ensembl Protein Viewer:ENSP00000284110.1Re-query CCDS DB by Nucleotide ID:ENST00000284110Re-query CCDS DB by Protein ID:ENSP00000284110
Original member Current member NCBI NM_006042.3 NP_006033.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006042.3Link to Protein Sequence:NP_006033.1Re-query CCDS DB by Nucleotide ID:NM_006042Re-query CCDS DB by Protein ID:NP_006033Link to BLAST:NP_006033.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006033.1 406 Q9Y663 406 100% 0 0

Chromosomal Locations for CCDS 11165.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 13496197 13496818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 13600531 13601129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1221 nt):
ATGGCCCCTCCGGGCCCGGCCAGTGCCCTCTCCACCTCGGCCGAGCCGCTGTCCCGCAGCATCTTCCGGA
AGTTCTTGCTGATGCTCTGCTCCCTGCTCACGTCCCTTTACGTCTTCTACTGCCTGGCCGAGCGCTGCCA
GACCCTGTCCGGCCCCGTCGTGGGGCTGTCCGGCGGCGGCGAGGAGGCGGGGGCCCCTGGTGGCGGCGTC
CTGGCCGGAGGCCCGAGGGAGCTGGCGGTGTGGCCGGCGGCGGCACAGAGAAAGCGCCTCCTGCAACTGC
CGCAGTGGCGGAGGCGCCGGCCGCCCGCGCCCCGCGACGACGGCGAGGAGGCGGCCTGGGAAGAAGAGTC
CCCTGGCCTGTCAGGGGGTCCGGGCGGCTCCGGGGCCGGAAGCACCGTGGCCGAGGCCCCGCCGGGGACC
CTGGCGCTGCTCCTGGACGAAGGCAGCAAGCAGCTGCCGCAGGCCATCATCATCGGAGTGAAGAAGGGCG
GCACGCGGGCGCTGCTGGAGTTCCTGCGCGTGCACCCCGACGTGCGCGCCGTGGGCGCCGAGCCCCACTT
CTTCGACCGCAGCTACGACAAGGGCCTCGCCTGGTACCGGGACCTGATGCCCAGAACCCTGGACGGGCAG
ATCACCATGGAGAAGACGCCCAGTTACTTCGTCACGCGGGAGGCCCCCGCGCGCATCTCGGCCATGTCCA
AGGACACCAAGCTCATCGTGGTGGTGCGGGACCCGGTGACCAGGGCCATCTCGGACTACACGCAGACGCT
GTCCAAGCGGCCCGACATCCCCACCTTCGAGAGCTTGACGTTCAAAAACAGGACAGCGGGCCTCATCGAC
ACGTCGTGGAGCGCCATCCAGATCGGCATCTACGCCAAGCACCTGGAGCACTGGCTGCGCCACTTCCCCA
TCCGCCAGATGCTCTTCGTGAGCGGCGAGCGGCTCATCAGCGACCCGGCCGGGGAGCTGGGCCGCGTGCA
AGACTTCCTGGGCCTCAAGAGGATCATCACGGACAAGCACTTCTACTTCAACAAGACCAAGGGCTTCCCC
TGCCTGAAGAAGGCGGAGGGCAGCAGCCGGCCCCATTGCCTGGGCAAGACCAAGGGCAGGACCCATCCTG
AGATCGACCGCGAGGTGGTGCGCAGGCTGCGCGAGTTCTACCGGCCTTTCAACCTCAAGTTCTACCAGAT
GACCGGGCACGACTTTGGCTGGGATGGATAA

Translation (406 aa):
MAPPGPASALSTSAEPLSRSIFRKFLLMLCSLLTSLYVFYCLAERCQTLSGPVVGLSGGGEEAGAPGGGV
LAGGPRELAVWPAAAQRKRLLQLPQWRRRRPPAPRDDGEEAAWEEESPGLSGGPGGSGAGSTVAEAPPGT
LALLLDEGSKQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDRSYDKGLAWYRDLMPRTLDGQ
ITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKRPDIPTFESLTFKNRTAGLID
TSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISDPAGELGRVQDFLGLKRIITDKHFYFNKTKGFP
CLKKAEGSSRPHCLGKTKGRTHPEIDREVVRRLREFYRPFNLKFYQMTGHDFGWDG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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