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Report for CCDS10074.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10074.1 Public Homo sapiens 15 OIP5 24 110 108 CCDS HistoryNCBI Gene:11339Re-query CCDS DB by CCDS ID:10074.1Re-query CCDS DB by GeneID:11339See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10074.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000220514.8 ENSP00000220514.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000220514.8Link to Ensembl Protein Viewer:ENSP00000220514.3Re-query CCDS DB by Nucleotide ID:ENST00000220514Re-query CCDS DB by Protein ID:ENSP00000220514
Original member Current member NCBI NM_007280.2 NP_009211.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007280.2Link to Protein Sequence:NP_009211.1Re-query CCDS DB by Nucleotide ID:NM_007280Re-query CCDS DB by Protein ID:NP_009211Link to BLAST:NP_009211.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009211.1 229 O43482 229 100% 0 0

Chromosomal Locations for CCDS 10074.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 41309754 41309849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41313273 41313354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41319658 41319780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41331915 41331981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41332240 41332561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (690 nt):
ATGGCGGCTCAGCCGCTGCGGCATCGCTCACGTTGTGCAACGCCGCCCCGGGGGGACTTTTGTGGTGGCA
CTGAGAGGGCGATTGACCAAGCTTCTTTTACGACCTCCATGGAGTGGGATACGCAGGTGGTGAAGGGGTC
CTCGCCGCTCGGCCCCGCAGGGCTGGGGGCTGAGGAGCCAGCCGCCGGCCCGCAGCTGCCGTCTTGGCTG
CAGCCTGAGAGGTGCGCTGTGTTCCAGTGCGCACAGTGTCACGCAGTGCTCGCCGACTCGGTGCACCTCG
CCTGGGACCTGTCGCGGTCCCTCGGGGCCGTGGTCTTCTCCAGAGTTACAAATAACGTCGTTTTGGAAGC
GCCCTTCCTAGTTGGCATTGAAGGTTCACTCAAAGGCAGTACTTACAACCTTTTATTCTGTGGTTCTTGT
GGGATTCCCGTTGGTTTCCATCTGTATTCTACCCATGCTGCCCTGGCTGCCTTGAGAGGTCACTTCTGCC
TTTCCAGTGACAAAATGGTGTGCTATCTCTTAAAAACAAAAGCCATAGTAAATGCATCAGAGATGGATAT
TCAAAATGTTCCTCTATCAGAAAAGATTGCAGAGCTGAAAGAGAAGATAGTGCTAACGCACAATCGCTTA
AAATCACTAATGAAGATTCTGAGTGAAGTGACTCCTGACCAGTCCAAGCCAGAAAACTGA

Translation (229 aa):
MAAQPLRHRSRCATPPRGDFCGGTERAIDQASFTTSMEWDTQVVKGSSPLGPAGLGAEEPAAGPQLPSWL
QPERCAVFQCAQCHAVLADSVHLAWDLSRSLGAVVFSRVTNNVVLEAPFLVGIEGSLKGSTYNLLFCGSC
GIPVGFHLYSTHAALAALRGHFCLSSDKMVCYLLKTKAIVNASEMDIQNVPLSEKIAELKEKIVLTHNRL
KSLMKILSEVTPDQSKPEN


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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