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Report for CCDS10205.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10205.1 Public Homo sapiens 15 IGDCC3 24 110 108 CCDS HistoryNCBI Gene:9543Re-query CCDS DB by CCDS ID:10205.1Re-query CCDS DB by GeneID:9543See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10205.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000327987.9 ENSP00000332773.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000327987.9Link to Ensembl Protein Viewer:ENSP00000332773.4Re-query CCDS DB by Nucleotide ID:ENST00000327987Re-query CCDS DB by Protein ID:ENSP00000332773
Original member Current member NCBI NM_004884.4 NP_004875.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004884.4Link to Protein Sequence:NP_004875.2Re-query CCDS DB by Nucleotide ID:NM_004884Re-query CCDS DB by Protein ID:NP_004875Link to BLAST:NP_004875.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004875.2 814 Q8IVU1 814 100% 0 0

Chromosomal Locations for CCDS 10205.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 65328909 65329148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65329390 65329597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65329726 65329864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65330293 65330397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65330550 65330741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65331050 65331214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65331412 65331659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65331941 65332106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65333257 65333415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65334728 65334865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65335291 65335421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65335812 65335956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65375097 65375402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65377686 65377788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2445 nt):
ATGGCTGTGCAGCGCGCCGCGTCTCCGCGCCGCCCGCCCGCCCCGCTCTGGCCCCGGCTCCTGCTGCCGC
TGCTGTTGCTGCTGCTGCCCGCGCCGAGCGAGGGTCTTGGCCACTCTGCTGAACTGGCATTTGCTGTGGA
GCCAAGTGATGATGTTGCCGTCCCCGGGCAGCCTATAGTGCTGGACTGCAGGGTGGAGGGGACCCCTCCA
GTGCGAATCACCTGGAGGAAGAATGGGGTAGAGCTGCCAGAGAGTACCCACTCCACCTTGCTGGCCAATG
GGTCCTTGATGATCCGTCACTTCAGGCTGGAGCCGGGAGGCAGCCCTTCGGATGAAGGTGACTATGAGTG
TGTGGCCCAGAACCGCTTTGGGCTGGTGGTCAGCCGGAAGGCTCGCATCCAAGCTGCAACCATGTCGGAC
TTCCACGTGCATCCCCAGGCCACCGTGGGTGAGGAGGGTGGTGTGGCCCGCTTCCAGTGCCAAATCCATG
GGCTTCCCAAACCCCTGATCACTTGGGAGAAGAACAGAGTCCCAATTGACACGGACAATGAGAGGTACAC
ATTGCTGCCCAAGGGGGTCCTGCAGATCACAGGACTTCGAGCTGAGGACGGTGGCATCTTCCACTGTGTG
GCCTCAAACATCGCCAGTATCCGGATCAGCCACGGGGCCAGGCTCACTGTGTCAGGCTCGGGCTCTGGGG
CCTACAAGGAGCCAGCCATCCTCGTGGGGCCTGAGAACCTCACCCTGACAGTGCACCAGACCGCGGTGCT
TGAGTGTGTCGCCACGGGCAACCCGCGCCCCATTGTGTCCTGGAGCCGCCTGGATGGTCGCCCTATCGGG
GTGGAGGGCATCCAGGTGCTGGGCACAGGAAACCTCATCATCTCAGACGTGACGGTCCAGCACTCTGGCG
TCTACGTCTGTGCAGCCAACAGACCTGGCACCCGGGTGAGGAGAACGGCACAGGGCCGGCTGGTGGTGCA
AGCCCCAGCTGAGTTTGTGCAGCATCCCCAGTCCATCTCCAGGCCAGCTGGGACCACAGCCATGTTCACC
TGCCAAGCCCAGGGTGAGCCACCGCCTCATGTCACGTGGCTGAAAAATGGACAGGTGCTGGGGCCAGGAG
GCCACGTCAGGCTCAAGAATAACAACAGCACACTGACCATTTCTGGAATCGGTCCTGAGGATGAAGCCAT
TTATCAGTGTGTGGCCGAGAACAGTGCGGGCTCATCACAGGCCAGTGCCAGGCTGACCGTACTGTGGGCT
GAGGGGCTCCCCGGGCCTCCCCGCAATGTGCGGGCAGTCTCTGTGTCTTCCACTGAGGTGCGTGTGTCCT
GGAGTGAGCCGCTGGCCAACACCAAGGAGATCATCGGCTACGTCCTGCACATCAGGAAGGCTGCTGACCC
ACCGGAGCTGGAGTATCAGGAGGCAGTCAGCAAGAGCACCTTTCAGCACCTGGTCAGCGACCTGGAGCCC
TCCACAGCCTACAGTTTCTACATCAAGGCCTACACACCAAGGGGGGCCAGCTCAGCCTCTGTGCCCACCC
TAGCTAGCACCCTGGGTGAAGCCCCTGCCCCACCCCCACTGTCAGTGCGAGTCCTGGGCAGCTCCTCCTT
GCAGCTGCTGTGGGAGCCTTGGCCCCGGCTGGCCCAGCACGAGGGCGGCTTCAAGCTGTTTTACCGCCCA
GCAAGCAAGACCTCCTTCACCGGCCCCATCCTGCTGCCTGGAACCGTCTCCTCCTACAACCTCAGCCAGC
TCGACCCCACTGCAGTGTATGAGGTGAAGCTGCTCGCCTACAACCAGCATGGAGATGGCAATGCCACAGT
CCGCTTTGTGTCTTTGAGGGGAGCATCTGAGAGGACAGCCTTGAGCCCACCATGTGACTGCCGGAAGGAG
GAGGCCGCCAACCAGACGTCCACCACAGGCATCGTCATCGGCATCCACATCGGGGTCACTTGCATCATCT
TCTGTGTCCTCTTCCTCCTGTTCGGCCAAAGGGGCAGGGTCCTCCTGTGTAAAGATGTGGAAAACCAGCT
GTCCCCTCCACAGGGTCCCCGGAGCCAGAGGGACCCTGGCATTCTAGCCCTAAATGGGGCGAGACGGGGA
CAGCGGGGCCAGCTGGGCCGAGACGAGAAACGTGTGGATATGAAGGAGCTGGAGCAGCTGTTCCCCCCGG
CCAGCGCAGCAGGGCAGCCGGACCCCAGACCCACACAGGATCCTGCAGCCCCCGCTCCGTGTGAGGAGAC
CCAGCTCTCCGTGCTGCCACTTCAGGGGTGCGGCCTGATGGAGGGGAAGACGACGGAGGCGAAGACCACA
GAGGCCACGGCTCCCTGCGCCGGCCTGGCGGCTGCCCCACCACCCCCAGATGGAGGCCCTGGCCTCCTCA
GTGAAGGCCAGGCTTCCAGGCCTGCAGCGGCCCGGGTTACCCAGCCAGCTCACTCGGAACAGTAG

Translation (814 aa):
MAVQRAASPRRPPAPLWPRLLLPLLLLLLPAPSEGLGHSAELAFAVEPSDDVAVPGQPIVLDCRVEGTPP
VRITWRKNGVELPESTHSTLLANGSLMIRHFRLEPGGSPSDEGDYECVAQNRFGLVVSRKARIQAATMSD
FHVHPQATVGEEGGVARFQCQIHGLPKPLITWEKNRVPIDTDNERYTLLPKGVLQITGLRAEDGGIFHCV
ASNIASIRISHGARLTVSGSGSGAYKEPAILVGPENLTLTVHQTAVLECVATGNPRPIVSWSRLDGRPIG
VEGIQVLGTGNLIISDVTVQHSGVYVCAANRPGTRVRRTAQGRLVVQAPAEFVQHPQSISRPAGTTAMFT
CQAQGEPPPHVTWLKNGQVLGPGGHVRLKNNNSTLTISGIGPEDEAIYQCVAENSAGSSQASARLTVLWA
EGLPGPPRNVRAVSVSSTEVRVSWSEPLANTKEIIGYVLHIRKAADPPELEYQEAVSKSTFQHLVSDLEP
STAYSFYIKAYTPRGASSASVPTLASTLGEAPAPPPLSVRVLGSSSLQLLWEPWPRLAQHEGGFKLFYRP
ASKTSFTGPILLPGTVSSYNLSQLDPTAVYEVKLLAYNQHGDGNATVRFVSLRGASERTALSPPCDCRKE
EAANQTSTTGIVIGIHIGVTCIIFCVLFLLFGQRGRVLLCKDVENQLSPPQGPRSQRDPGILALNGARRG
QRGQLGRDEKRVDMKELEQLFPPASAAGQPDPRPTQDPAAPAPCEETQLSVLPLQGCGLMEGKTTEAKTT
EATAPCAGLAAAPPPPDGGPGLLSEGQASRPAAARVTQPAHSEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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