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Report for CCDS10420.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10420.1 Public Homo sapiens 16 WDR24 24 110 108 CCDS HistoryNCBI Gene:84219Re-query CCDS DB by CCDS ID:10420.1Re-query CCDS DB by GeneID:84219See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10420.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000293883.9 ENSP00000293883.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000293883.9Link to Ensembl Protein Viewer:ENSP00000293883.4Re-query CCDS DB by Nucleotide ID:ENST00000293883Re-query CCDS DB by Protein ID:ENSP00000293883
Original member Current member NCBI NM_032259.4 NP_115635.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032259.4Link to Protein Sequence:NP_115635.1Re-query CCDS DB by Nucleotide ID:NM_032259Re-query CCDS DB by Protein ID:NP_115635Link to BLAST:NP_115635.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115635.1 790 Q96S15 790 100% 0 0

Chromosomal Locations for CCDS 10420.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 684734 684902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 684992 685176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 685257 685597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 685679 685783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 685869 685990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 686068 686186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 686744 687416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 687562 687739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 689160 689640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2373 nt):
ATGGAGAAGATGTCCCGTGTGACCACAGCCCTGGGTGGCAGCGTGCTGACAGGCCGCACCATGCACTGCC
ACCTGGATGCTCCCGCCAATGCCATCAGTGTGTGCCGCGACGCAGCCCAGGTGGTCGTGGCAGGCCGTAG
CATCTTCAAGATCTATGCCATCGAGGAGGAACAGTTCGTGGAAAAGCTGAACCTGCGTGTGGGGCGCAAG
CCTTCGCTTAACCTGAGCTGTGCTGACGTGGTCTGGCACCAGATGGATGAGAACCTGCTGGCCACAGCAG
CCACCAATGGCGTGGTGGTCACGTGGAACCTGGGCCGGCCATCCCGCAACAAGCAGGACCAGCTGTTCAC
AGAACACAAGCGCACGGTAAACAAAGTCTGCTTCCACCCCACCGAAGCCCACGTGCTGCTCAGTGGCTCC
CAGGATGGCTTCATGAAGTGCTTTGACCTCCGCAGAAAGGACTCTGTCAGCACCTTCTCGGGCCAGTCGG
AGAGCGTGCGGGACGTGCAGTTCAGTATCCGGGACTACTTCACCTTCGCCTCCACCTTTGAGAACGGCAA
TGTGCAGCTCTGGGACATCCGGCGTCCCGACCGGTGCGAGAGGATGTTCACAGCCCACAACGGACCCGTC
TTCTGCTGCGACTGGCACCCCGAGGACAGGGGCTGGTTGGCCACTGGAGGGCGCGACAAGATGGTGAAGG
TCTGGGACATGACCACGCACCGTGCCAAGGAGATGCACTGTGTGCAGACCATCGCCTCGGTGGCCCGTGT
GAAGTGGCGGCCAGAGTGCCGCCACCACCTGGCCACGTGCTCCATGATGGTGGACCACAACATCTATGTT
TGGGACGTGCGCCGGCCCTTCGTGCCAGCTGCCATGTTTGAGGAACACCGAGACGTCACCACGGGAATTG
CCTGGCGCCACCCCCACGACCCCTCCTTCCTGCTGTCTGGCTCCAAGGACAGCTCGCTGTGCCAGCACCT
GTTCCGCGACGCCAGCCAGCCCGTCGAGCGCGCCAACCCTGAGGGCCTCTGCTACGGCCTCTTCGGGGAC
CTGGCCTTCGCCGCCAAGGAGAGCCTCGTGGCTGCCGAGTCGGGGCGCAAGCCCTACACTGGCGACCGGC
GCCACCCCATCTTCTTTAAGCGCAAGCTGGACCCTGCCGAGCCCTTCGCAGGCCTCGCCTCCAGTGCCCT
CAGTGTCTTTGAGACGGAGCCAGGTGGCGGCGGCATGCGCTGGTTTGTGGACACAGCTGAGCGTTATGCG
CTGGCTGGCCGGCCACTGGCCGAGCTCTGTGACCACAACGCAAAGGTGGCTCGAGAGCTTGGCCGCAACC
AGGTGGCGCAAACGTGGACCATGCTGCGGATCATCTACTGCAGCCCTGGCCTAGTGCCCACTGCAAACCT
CAACCACAGTGTGGGCAAGGGTGGCTCCTGTGGCCTCCCGCTCATGAACAGTTTCAACCTGAAGGATATG
GCCCCAGGGTTGGGCAGTGAGACGCGGCTGGACCGCAGCAAAGGAGATGCACGGAGCGACACAGTTCTGC
TCGACTCCTCGGCCACACTCATCACCAATGAGGATAACGAGGAAACCGAGGGCAGCGACGTACCTGCCGA
CTACCTGCTGGGTGACGTGGAAGGTGAGGAGGACGAGCTGTACCTGCTGGATCCGGAACACGCGCACCCC
GAGGACCCTGAGTGCGTGCTGCCGCAGGAGGCCTTTCCGCTGCGCCACGAGATCGTGGACACGCCTCCCG
GGCCCGAGCACCTGCAGGACAAGGCCGACTCCCCGCACGTGAGCGGCAGCGAGGCGGATGTGGCCTCCCT
GGCCCCCGTGGACTCCTCCTTCTCGCTCCTGTCTGTCTCACACGCGCTCTACGACAGCCGCCTGCCGCCC
GACTTCTTCGGCGTGCTGGTGCGCGACATGCTGCACTTCTACGCTGAGCAGGGCGACGTGCAGATGGCTG
TGTCTGTGCTCATCGTCCTGGGTGAACGGGTGCGCAAGGACATCGACGAGCAGACCCAGGAGCACTGGTA
CACTTCCTACATCGACCTGCTGCAGCGCTTCCGCCTCTGGAACGTGTCCAACGAGGTGGTCAAGCTGAGC
ACCAGCCGCGCCGTCAGCTGCCTCAACCAGGCCTCCACCACCCTGCACGTCAACTGCAGCCACTGCAAGC
GGCCCATGAGCAGCCGGGGCTGGGTCTGCGACAGGTGCCACCGCTGCGCCAGCATGTGTGCCGTCTGCCA
CCACGTAGTCAAGGGTCTCTTCGTGTGGTGCCAGGGCTGCAGCCACGGCGGCCACCTGCAGCACATCATG
AAGTGGCTGGAAGGCAGCTCCCACTGTCCCGCAGGCTGCGGCCACCTCTGCGAGTACTCCTGA

Translation (790 aa):
MEKMSRVTTALGGSVLTGRTMHCHLDAPANAISVCRDAAQVVVAGRSIFKIYAIEEEQFVEKLNLRVGRK
PSLNLSCADVVWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLSGS
QDGFMKCFDLRRKDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPV
FCCDWHPEDRGWLATGGRDKMVKVWDMTTHRAKEMHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYV
WDVRRPFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGSKDSSLCQHLFRDASQPVERANPEGLCYGLFGD
LAFAAKESLVAAESGRKPYTGDRRHPIFFKRKLDPAEPFAGLASSALSVFETEPGGGGMRWFVDTAERYA
LAGRPLAELCDHNAKVARELGRNQVAQTWTMLRIIYCSPGLVPTANLNHSVGKGGSCGLPLMNSFNLKDM
APGLGSETRLDRSKGDARSDTVLLDSSATLITNEDNEETEGSDVPADYLLGDVEGEEDELYLLDPEHAHP
EDPECVLPQEAFPLRHEIVDTPPGPEHLQDKADSPHVSGSEADVASLAPVDSSFSLLSVSHALYDSRLPP
DFFGVLVRDMLHFYAEQGDVQMAVSVLIVLGERVRKDIDEQTQEHWYTSYIDLLQRFRLWNVSNEVVKLS
TSRAVSCLNQASTTLHVNCSHCKRPMSSRGWVCDRCHRCASMCAVCHHVVKGLFVWCQGCSHGGHLQHIM
KWLEGSSHCPAGCGHLCEYS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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