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Report for CCDS10631.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10631.1 Public Homo sapiens 16 GSG1L 24 110 108 CCDS HistoryNCBI Gene:146395Re-query CCDS DB by CCDS ID:10631.1Re-query CCDS DB by GeneID:146395See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10631.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380897.7 ENSP00000370282.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380897.7Link to Ensembl Protein Viewer:ENSP00000370282.3Re-query CCDS DB by Nucleotide ID:ENST00000380897Re-query CCDS DB by Protein ID:ENSP00000370282
Original member Current member NCBI NM_144675.3 NP_653276.1 Accepted alive Link to Nucleotide Sequence:NM_144675.3Link to Protein Sequence:NP_653276.1Re-query CCDS DB by Nucleotide ID:NM_144675Re-query CCDS DB by Protein ID:NP_653276Link to BLAST:NP_653276.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653276.1 176 Q6UXU4-2 176 100% 0 0

Chromosomal Locations for CCDS 10631.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 27791370 27791467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27807487 27807554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27828789 27828956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27844950 27845061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27884486 27884570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGTGTCTCGAGCTCTTCCACTCCAGCAATGTCATCGACGGGCTCAAGCTCAATGCCTTCGCGGCTGTCT
TCACGGTGCTCTCAGGCCTCCTGGGAATGGTCGCCCACATGATGTACACGCAGGTGTTCCAGGTCACCGT
GAGCCTCGGTCCTGAGGACTGGAGACCCCATTCCTGGGACTACGGGTGGTCCTTCTGCCTGGCGTGGGGC
TCCTTTACCTGCTGCATGGCAGCCTCTGTCACCACGCTCAACTCCTACACCAAGACGGTCATTGAGTTCC
GGCACAAGCGCAAGGTCTTTGAGCAGGGCTACCGGGAAGAGCCGACCTTCATAGACCCTGAGGCCATCAA
GTACTTCCGGGAGAGGATGGAGAAGAGGGACGGGAGCGAGGAGGACTTTCACTTAGACTGCCGCCACGAG
AGATACCCTGCCCGACACCAGCCACACATGGCGGATTCCTGGCCCCGGAGCTCCGCACAGGAAGCACCAG
AGCTGAACCGACAGTGCTGGGTCTTGGGGCACTGGGTGTGA

Translation (176 aa):
MCLELFHSSNVIDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVSLGPEDWRPHSWDYGWSFCLAWG
SFTCCMAASVTTLNSYTKTVIEFRHKRKVFEQGYREEPTFIDPEAIKYFRERMEKRDGSEEDFHLDCRHE
RYPARHQPHMADSWPRSSAQEAPELNRQCWVLGHWV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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