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Report for CCDS10852.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10852.1 Public Homo sapiens 16 CTRL 24 110 108 CCDS HistoryNCBI Gene:1506Re-query CCDS DB by CCDS ID:10852.1Re-query CCDS DB by GeneID:1506See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10852.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000574481.6 ENSP00000458537.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000574481.6Link to Ensembl Protein Viewer:ENSP00000458537.2Re-query CCDS DB by Nucleotide ID:ENST00000574481Re-query CCDS DB by Protein ID:ENSP00000458537
Original member Current member NCBI NM_001907.3 NP_001898.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001907.3Link to Protein Sequence:NP_001898.1Re-query CCDS DB by Nucleotide ID:NM_001907Re-query CCDS DB by Protein ID:NP_001898Link to BLAST:NP_001898.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001898.1 264 P40313 264 100% 0 0

Chromosomal Locations for CCDS 10852.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67929934 67930095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67930185 67930318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67930408 67930588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67930726 67930807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67930920 67930999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67931098 67931201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67931801 67931852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (795 nt):
ATGTTGCTGCTCAGCCTGACCCTAAGCCTGGTTCTCCTCGGCTCCTCCTGGGGCTGCGGCATTCCTGCCA
TCAAACCGGCACTGAGCTTCAGCCAGAGGATTGTCAACGGGGAGAATGCAGTGTTGGGCTCCTGGCCCTG
GCAGGTGTCCCTGCAGGACAGCAGCGGCTTCCACTTCTGCGGTGGTTCTCTCATCAGCCAGTCCTGGGTG
GTCACTGCTGCCCACTGCAATGTCAGCCCTGGCCGCCATTTTGTTGTCCTGGGCGAGTATGACCGATCAT
CAAACGCAGAGCCCTTGCAGGTTCTGTCCGTCTCTCGGGCCATTACACACCCTAGCTGGAACTCTACCAC
CATGAACAATGACGTGACGCTGCTGAAGCTCGCCTCGCCAGCCCAGTACACAACACGCATCTCGCCAGTT
TGCCTGGCATCCTCAAACGAGGCTCTGACTGAAGGCCTCACGTGTGTCACCACCGGCTGGGGTCGCCTCA
GTGGCGTGGGCAATGTGACACCAGCACATCTGCAGCAGGTGGCTTTGCCCCTGGTCACTGTGAATCAGTG
CCGGCAGTACTGGGGCTCAAGTATCACTGACTCCATGATCTGTGCAGGTGGCGCAGGTGCCTCCTCGTGC
CAGGGTGACTCCGGAGGCCCTCTTGTCTGCCAGAAGGGAAACACATGGGTGCTTATTGGTATTGTCTCCT
GGGGCACCAAAAACTGCAATGTGCGCGCACCTGCTGTGTATACTCGAGTTAGCAAGTTCAGCACCTGGAT
CAACCAGGTCATAGCCTACAACTGA

Translation (264 aa):
MLLLSLTLSLVLLGSSWGCGIPAIKPALSFSQRIVNGENAVLGSWPWQVSLQDSSGFHFCGGSLISQSWV
VTAAHCNVSPGRHFVVLGEYDRSSNAEPLQVLSVSRAITHPSWNSTTMNNDVTLLKLASPAQYTTRISPV
CLASSNEALTEGLTCVTTGWGRLSGVGNVTPAHLQQVALPLVTVNQCRQYWGSSITDSMICAGGAGASSC
QGDSGGPLVCQKGNTWVLIGIVSWGTKNCNVRAPAVYTRVSKFSTWINQVIAYN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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