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Report for CCDS11271.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11271.1 Public Homo sapiens 17 ZNF207 24 110 108 CCDS HistoryNCBI Gene:7756Re-query CCDS DB by CCDS ID:11271.1Re-query CCDS DB by GeneID:7756See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 11271.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321233.10 ENSP00000322777.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000321233.10Link to Ensembl Protein Viewer:ENSP00000322777.6Re-query CCDS DB by Nucleotide ID:ENST00000321233Re-query CCDS DB by Protein ID:ENSP00000322777
Original member Current member NCBI NM_003457.4 NP_003448.1 Accepted alive Link to Nucleotide Sequence:NM_003457.4Link to Protein Sequence:NP_003448.1Re-query CCDS DB by Nucleotide ID:NM_003457Re-query CCDS DB by Protein ID:NP_003448Link to BLAST:NP_003448.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003448.1 478 O43670-1 478 100% 0 0

Chromosomal Locations for CCDS 11271.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 32350286 32350326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32351786 32351912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32358503 32358641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32360598 32360765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32360892 32360967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32362914 32362984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32365330 32365487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32366665 32366757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32367772 32368014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32369295 32369454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32369599 32369759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1437 nt):
ATGGGTCGCAAGAAGAAGAAGCAGCTGAAGCCGTGGTGCTGGTATTGTAATAGAGATTTTGATGATGAGA
AGATCCTTATTCAGCACCAAAAAGCAAAGCATTTTAAATGCCATATATGTCACAAGAAATTGTATACAGG
ACCTGGCTTAGCTATTCATTGCATGCAGGTACATAAAGAAACAATAGATGCCGTACCAAATGCAATACCT
GGAAGAACAGACATAGAGTTGGAAATATATGGTATGGAAGGTATTCCAGAAAAAGACATGGATGAAAGAC
GACGACTTCTTGAACAGAAAACACAAGAAAGTCAAAAAAAGAAGCAACAAGATGATTCTGATGAATATGA
TGATGACGACTCTGCAGCCTCAACTTCATTTCAGCCACAGCCTGTTCAACCTCAGCAAGGTTATATTCCT
CCAATGGCACAGCCAGGACTGCCACCAGTACCAGGAGCACCAGGAATGCCTCCAGGCATACCTCCATTAA
TGCCAGGTGTTCCTCCTCTGATGCCAGGAATGCCACCAGTTATGCCAGGCATGCCACCTGGAATGATGCC
AATGGGTGGAATGATGCCACCTGGACCAGGAATACCACCTCTGATGCCTGGAATGCCACCAGGTATGCCC
CCACCTGTTCCACGTCCTGGAATTCCTCCAATGACTCAAGCACAGGCTGTTTCAGCGCCAGGTATTCTTA
ATAGACCACCTGCACCAACAGCAACTGTACCTGCCCCACAGCCTCCAGTTACTAAGCCTCTTTTCCCCAG
TGCTGGACAGATGGGGACACCTGTCACAAGCTCAAGTACAGCTTCATCCAATTCAGAAAGTCTGTCTGCA
TCTTCTAAAGCTCTGTTTCCTAGCACAGCACAAGCTCAGGCAGCTGTCCAAGGACCTGTTGGTACAGATT
TCAAACCCTTAAATAGTACCCCTGCAACAACTACAGAACCCCCAAAGCCTACATTCCCTGCTTATACACA
GTCTACAGCTTCAACAACTAGTACAACAAATAGTACTGCAGCTAAACCAGCGGCTTCAATAACAAGTAAG
CCTGCTACACTTACAACAACTAGTGCAACCAGTAAGTTGATCCATCCAGATGAGGATATATCCCTGGAAG
AGAGAAGGGCACAGTTACCTAAGTATCAACGTAATCTTCCTCGGCCAGGACAGGCCCCCATCGGTAATCC
ACCAGTTGGACCAATTGGAGGTATGATGCCACCACAGCCAGGCATCCCACAGCAACAAGGAATGAGACCC
CCAATGCCACCTCATGGTCAGTATGGTGGTCATCATCAAGGCATGCCAGGATACCTTCCTGGTGCTATGC
CCCCGTATGGGCAGGGACCGCCAATGGTGCCCCCTTACCAGGGTGGGCCTCCTCGACCTCCGATGGGAAT
GAGACCTCCTGTAATGTCGCAAGGTGGCCGTTACTGA

Translation (478 aa):
MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKETIDAVPNAIP
GRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIP
PMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMP
PPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSA
SSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSK
PATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRP
PMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVMSQGGRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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